Rosa chinensis (China rose): 112202694
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Entry
112202694 CDS
T06020
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112202694
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112202694
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112202694
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C85
112202694
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
112202694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
Motif
Other DBs
NCBI-GeneID:
112202694
NCBI-ProteinID:
XP_024199469
LinkDB
All DBs
Position
5:41756405..41764020
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AA seq
536 aa
AA seq
DB search
MTRILVQRGSSSGSSSNPSRSSSLSGSSSAWSQPQVNTPQVLSAVKDEDIEEEPQEHVIV
DDPSENCGSSDNNAVKNDDVLMEGTHNDHTLSSSDELTEVERVTKNDIAGQGELMNGLGS
LTISERVKVDSVDSGGDALQNVIGSSQPPPPPVPPPKISSPNSNSRRTVTGSSTAVRIGP
SRRAVAWPVVSTRTSPTGSRPSSPRSHGEGEGYNSADEQGPCFVSSYDDMERERQFEIDI
RRAKGFEVKRMLEDGNCLFRAVADQVYGDSEAYDLTRQMCIDYMERERDHFSQFITEGFT
SYCKRKRRDKVYGNNVEIQALSEMYNRPIHIYSYSIEPINIFHGSYNTDTPPVRLSYHHG
NHYNSLVDPRRLTIGAGLGFSSLRGTNADKDQVKAAIKAQQDQQIDNALLAEGRFYSDLE
LTEKEIERMVMEASRAEYLADGTFKKQLGRRESSTSSCEPSSSGARSSGSETKPGGRDQG
GQDSTLSSSMQIVLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETSSSSRRKGKATE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgactaggattctggttcagcgaggttcctcaagtggttcttcttccaacccaagccgc
tcttcttccttgtctggctcttcctcggcttggtcacagccacaggttaatactcctcag
gtcctctcggctgtgaaagatgaggatattgaagaggagccacaggaacatgttattgtg
gatgatccttcagagaattgtgggagtagtgacaataatgccgtgaaaaatgatgatgtt
ttgatggaaggcactcataatgatcacactctaagttcaagtgatgaacttactgaagtt
gagagggttactaagaatgatattgccggacaaggggagttgatgaacggtttaggcagt
ttgacaatatctgaaagggtgaaagttgacagtgtggactctggtggggatgctttacaa
aatgtgattgggagttcacagccaccacctcctcctgttcctcccccaaaaatttcttca
ccaaactcaaattcaaggagaactgtcacaggaagttcaactgcggtcaggattggacct
tcaagaagagcagttgcctggccagttgtttcaactaggacgtcaccaactgggtcacgg
ccttcttctcccaggtctcatggtgaaggcgaggggtacaatagtgccgatgagcaaggc
ccttgctttgtgtcctcctatgacgatatggaaagggaacggcagtttgaaattgatatt
agacgtgcaaaagggtttgaagtgaaaagaatgctggaggatggcaattgtctgtttcgt
gctgttgcagaccaggtttatggggattctgaagcgtacgacttgactagacaaatgtgc
atagattatatggagcgcgagagggatcatttttctcaatttattacagaaggatttact
tcttattgcaagaggaaaagaagagacaaggtctacggaaataatgtggagatccaggcc
ttatctgaaatgtataatcggcccatccatatttattcctatagcattgaacctatcaat
atcttccatggaagttataataccgacacaccacctgtacggttaagttaccaccatgga
aatcattacaactctcttgttgatcctcgccgcttgaccattggtgcaggacttgggttc
agcagtcttcgcgggacaaatgctgacaaggatcaggtcaaggctgccattaaggctcaa
caagaccaacaaatcgataatgcacttttagctgaggggcgattttactcggatcttgag
cttactgagaaagaaattgaacgcatggtgatggaagcttctagggctgagtatcttgca
gatggcacattcaagaaacaacttggccgcagagaatcttctacttcaagctgtgagcct
tcatcttctggagctagatcatcaggcagtgagactaagccagggggtagagaccagggt
ggccaggattccaccttaagcagtagtatgcaaattgttctgtcgatgggattcagctat
ctgcaggccatcgaagcttacagcatatttggagatgacgtagattccatggtttgttac
ttgttggaaactagcagcagtagcaggcgcaaaggcaaggcaacagaataa
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