Rosa chinensis (China rose): 112202816
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Entry
112202816 CDS
T06020
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcn03012
]
112202816
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112202816
Translation factors [BR:
rcn03012
]
Eukaryotic type
Initiation factors
MTIFs
112202816
Prokaryotic type
112202816
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
112202816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
Ras
IF2_N
GTP_EFTU_D2
RsgA_GTPase
Roc
Arf
DUF591
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
112202816
NCBI-ProteinID:
XP_024199600
LinkDB
All DBs
Position
5:21031426..21039099
Genome browser
AA seq
1029 aa
AA seq
DB search
MFILVGSMQGTMVSLASLVSLGSVVTLAGSSERSGSLVRKVSLSKSSFRGNRRWHCVRLS
VCKFSVTTTDFVAEHSNEVSLDSNYRGSSNDASVANADFVLKPSPKPVLKPSEGSNAEPP
LLSLNAADWDASKTSGDSDVEEEDKSNVIESLGEVLEKAEKLEAPKVDDLSTKKASKPVN
RPAPSNATTTSGNARPVNSTASTKAKTLKSVWRKGDTVAAVQKVVKELPKVNNTVRREEP
KTGGGVKVESTPGPPLRPPPPPLRPQPTLQAKPSTAPPPTIKKPVVLKDLGAAPKSAVID
DTGSPPKTKERKPILIDKFSTKKPGVDSVVSQAVLAPTKPAKGSPPGRFKDGFRKKNAQP
GGLRRRKANDELTDDESSELNVSKAARKGRKWSKASRKAARLQAAKDAAPVKVDILEVDD
DGMLIDELAFNLAINESEILGSLYSRGIKPDGVQTLSKDMVKMICKEYDVEVIDVDPVKV
EEGARKKEILDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIG
AYKVLVPVDGKLQSCIFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTKEAIAH
AKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDVPMVQISALKGKNIDDLL
ETVMLVAELQELKANPDRSAKGTVIEAGLDKSRGPLVTLIVQNGTLRKGDIVVCGEAFGK
VRALFDDGGNRVSEAGPSIPVQVIGLNNVPIAGDEFEVVSSLDIARERAESRAESLRNER
ISAKAGDGKVTLSSLASAVSAGKLAGLDLHQLNVILKVDLQGSIEAVRQALQVLPQDNVT
LKFLMETTGDVNTSDVDLAAASKAIILGFNIKAPGSVKSYAENKGVEIRLYKVIYDLIDD
VRNAMEGLLQPVEEQVTIGSAEVRAIFSSGSGRVAGCMVNEGKVVKGCGIQVIRRGKVVH
VGVLDSLKRVKEVVKEVNAGLECGIGVEDYDDFEEGDILEAFNTVQKKRTLEEASASMAA
AVEGTGVEY
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcatattagttggaagcatgcagggaacaatggtttctttggcttcccttgttagt
ttgggaagtgttgttacgcttgcgggttcatccgaaaggtctggctcgcttgttaggaag
gtttcgttgtctaagagtagttttaggggtaataggagatggcattgtgtgagattgtca
gtttgtaaattttcggtcacaacaactgatttcgttgctgagcatagcaatgaggtatcc
cttgattctaactatagaggaagtagtaatgatgcttctgttgccaatgctgattttgta
cttaagccgtccccgaagccagtattgaagccctctgaggggtccaatgctgaaccgccc
cttttaagccttaatgctgctgattgggacgcctcaaaaactagtggggattcggatgtg
gaagaggaagataagagtaatgtgattgagtcacttggagaggttttggagaaggctgaa
aagctagaagctccaaaagtggatgatttgagtactaagaaagccagtaagcctgtaaat
agacctgcaccttctaatgcaactactacttcaggaaatgctagaccagtaaactcgaca
gctagtaccaaggctaaaactttgaagagtgtgtggcgaaaaggagacacagttgcagct
gtgcaaaaggttgtaaaggaattacctaaggttaataatacagttcggagagaagaacca
aaaacagggggaggggtgaaggtagagtctacacccggtcctcctttaagacctcctcct
ccacctttgagaccccaaccaacattacaagcaaagccttctacagctcctccacccacg
ataaagaaacctgtagttctgaaggatcttggggcagctccaaagtcggccgtgattgat
gacactggttcacccccaaaaactaaagaaaggaagccaattttgattgacaaattttct
accaagaagccaggggtcgattctgtggtttctcaagcagttttagctcctacaaaacca
gccaagggctctccgcctggcagattcaaagatgggttccggaagaaaaatgctcaacct
ggaggactacgaaggcggaaggctaatgatgagctcactgatgatgagagttcggaactc
aatgtctctaaagcagcaaggaaagggaggaagtggagtaaagcaagcaggaaggcggca
agactccaggctgccaaagatgcagctcctgttaaagtagatattctagaggttgatgac
gatggcatgttaatagatgagttggccttcaatttggctattaatgaatccgaaattctc
ggatctctgtactccaggggaattaagcctgatggggttcaaactctgagcaaagatatg
gtgaagatgatttgtaaagagtatgatgtggaagtcatagatgttgacccagtaaaggtg
gaagaaggggcaagaaagaaagaaatactcgatgaagatgacctagacaaactagaagac
aggcctcctgtccttactataatgggtcatgtggatcatggcaagacaactctattggat
tacatccggaagagcaaggttgctgcctccgaggctggtggaattacgcaaggaattggg
gcatacaaggtgcttgtgccagttgatggcaagttgcaatcatgtattttccttgatact
cctggacatgaggcatttggagcaatgagagctcgtggagcaagggtgacagacatagct
atcattgttgtggctgctgatgatggaatccgccctcaaacaaaagaggccatcgctcat
gctaaagctgctggtgtgccgatagtaatagctataaataagatagacaaggatggagct
aatccagaacgagtcatgcaagagctttcttctataggtctaatgccggaggattggggt
ggtgacgtccccatggtccagattagtgctcttaaagggaagaatatagatgaccttttg
gaaactgtaatgctagttgcagagttgcaagagttaaaggccaatcctgatagaagtgca
aaaggcacggttattgaggccggtcttgataaatccagaggacctttagttacacttatc
gtgcaaaatggaacccttagaaagggggacatagtagtttgtggagaagcctttggaaag
gtacgggctttatttgatgatggtggaaatcgtgtcagtgaagctggaccctctatacca
gttcaggttattggattaaataatgttcctattgctggtgatgaatttgaggtcgtgagc
tcccttgatattgcacgtgaaagggcagagtcacgtgcagagtcattgcgaaatgaacgc
atatcagctaaggctggcgatgggaaggttactctttcttctttagcttctgcagtctcg
gcaggaaagctggctggacttgacttgcaccagctaaatgttattctgaaggttgatctt
cagggatctattgaggctgtcagacaagccctgcaggtgctccctcaagataatgtcacc
ttgaagtttctcatggaaacaacaggtgatgtaaacaccagcgatgttgatcttgctgcg
gccagcaaagccataattttgggattcaatatcaaagctccaggttctgttaaaagctat
gctgaaaacaagggtgtggagattcggctatataaagttatctatgaccttattgatgat
gtacgaaatgcaatggaaggactcctacagcctgttgaggaacaagtaacaattggttct
gcagaagtccgagccatattcagcagtggcagtggacgtgttgctggttgtatggtaaat
gaaggaaaagttgttaaaggctgtggcattcaggtcattcgaaggggaaaagtagttcat
gttggtgttcttgattctttaaaacgggttaaggaagtcgtgaaagaggtaaatgctgga
ctagagtgtggaattggggtggaagactatgacgattttgaggagggagacatactcgag
gccttcaacacagtccaaaagaagcggacacttgaagaggcgtctgcttccatggcagct
gcagtggaaggaacaggagtcgaatactag
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integrated database retrieval system
