KEGG   Rosa chinensis (China rose): 112202955
Entry
112202955         CDS       T06020                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rcn04812]
    112202955
Cytoskeleton proteins [BR:rcn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     112202955
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_Aladin WD40_RFWD3 Beta-prop_IFT122_1st eIF2A Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_WDR19_1st WD_LRWD1 WD40_like
Other DBs
NCBI-GeneID: 112202955
NCBI-ProteinID: XP_024199765
LinkDB
Position
5:complement(4346446..4348057)
AA seq 177 aa
MRSLTGHTSPVESVAFNSAEVLVLAGASTGATKIRDLEETKMVRILTGHRSSCSAVKFHP
FGEFFASGSMDTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDNVLKVWD
LTAGKLLHDFKFHERHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSNRPELV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgcggagtctcactggtcatacaagtccagttgaatctgtagcttttaattcagcagaa
gttttggtgcttgctggagcttctactggcgcaacaaaaataagggatctggaggaaaca
aagatggttcgtatacttaccggacacagatccagctgttctgctgttaaatttcatcca
tttggtgagttctttgcttctggttccatggacactaatctgaagatctgggacattaga
aagaagggatgcatccacacatacaaaggtcatactcaaggcattagtactattaagttc
actcccgatggtcgatgggtagtttctggtgggtttgacaatgttctaaaggtgtgggat
ctaactgctgggaagctcttgcatgattttaaattccatgaacgacatattcggtctata
gattttcacccccttgagtttctcttggccacaggttcagcagacagaactgtgaaattc
tgggatttggaaacttttgaactgattggatctaacaggcctgagttagtctga

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