Rosa chinensis (China rose): 112203421
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Entry
112203421 CDS
T06020
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112203421
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112203421
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
112203421
NCBI-ProteinID:
XP_024200158
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Position
5:21640794..21643344
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AA seq
366 aa
AA seq
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MAYGAVEGGITDNSQAFLKAWNDACKWTGRARVLVPRGIFKLFPVVFSGPCNGPIAFLIM
GTLRASTDPSTFNSENWINFRYLEQLTVAGGGTLDGQGSFVWPLNNCNNRPCKTLPISLS
FDFVTNASVAHLRSYNSKNAHIKVYGCNKMDFTKLRLSAPGDSPNTDGIKIGNSYRIRIS
RSVIGTGDDCIAILSGSKEIHISKIFCGPGHGISIGSLGGYDNEYDVEGVYVKDSGLKGT
TNGLRIKTWAYSHPLKVSKIRYENIVMTDVTNPIIIDQNYCPSPPCNQQVTSNVQISDVT
YNNIWGSSSSKEAVILKCSKTSPCKNMVMNNIKLSLNGPGGIASSSCENAIGVSYGTQNP
PSCIKV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcttatggagctgttgaaggtggaataactgataacagccaggcatttttgaaagca
tggaatgatgcctgtaaatggactggaagggcaagggttttggttccccgaggaatattc
aagttattcccagttgtattctcaggtccatgcaatggtccgattgcctttttgatcatg
gggactttaagagcctctactgatccatcaacatttaattctgaaaattggataaacttc
cgatacttggagcagttaaccgtagccggaggcggtaccttggacggccaaggatccttt
gtttggcctcttaacaactgcaacaatcgtccatgcaagacactccccatctctttgagt
tttgacttcgtcacaaatgcaagcgtcgctcacttgagatcatacaacagcaaaaatgcc
catatcaaggtttatggatgcaacaaaatggacttcaccaaacttagattgtcagctcca
ggtgatagcccaaacaccgatggcataaaaatcggaaactcctaccgcatcagaatctca
cgctcggttattggcaccggcgatgactgcattgcgatattgtcaggaagtaaggaaatc
cacatttctaaaattttttgcggtcctgggcatggaatcagcattggaagtctcggaggg
tatgataatgaatacgatgtggaaggagtatatgtgaaagatagcggtttaaaggggact
accaatggtctaagaatcaaaacatgggcttattctcatcccttgaaggtttcaaagatt
agatacgaaaacattgtgatgactgatgtcacgaatccaattattatcgatcaaaattat
tgccccagccctccctgcaatcaacaggttacttcgaatgtgcaaattagtgatgtgaca
tataataacatatggggaagttcttcttccaaagaagcagtaattctgaaatgcagcaaa
accagcccatgcaagaacatggtgatgaacaatatcaagttatccctcaatggtcctgga
ggtattgcgagttcttcctgcgaaaatgccattggcgtctcttacggcacacaaaaccct
ccttcttgcataaaagtctag
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