Rosa chinensis (China rose): 112203422
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Entry
112203422 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112203422
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
LRR_R13L1-DRL21
AAA_14
AAA_16
LRR_4
LRR_RPS2
Rad17
G-alpha
AAA_33
AAA_22
nSTAND3
AAA_7
AAA
SUS_EPBD
T2SSE
Septin
LRR_8
AAA_19
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
112203422
NCBI-ProteinID:
XP_024200159
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All DBs
Position
5:21666619..21669294
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AA seq
891 aa
AA seq
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MAELAIPLSLLVAEKAMSLCYQRNASKDPSNNIHDDVERAWKCLRRMQAYLGDSEEIDEG
SLMLQNRVAEVQSLAYEIEDALDKFISQIPHHFHSNIFSQKLHDVAHYREEKRARVELST
KIKDIEKKISSFSTLDSLLEPPSSSSTRKRDSLIHQVLEEDEIVGLEEPKERLSKQLMEE
DSRLKTILVVGPGGSGKTTVVKNVFDSTMVQRFFDCHAWIDLSRPPKAEDQKAELMHLKE
KRFLVVLDNVWTAQDLELITNALPRGLPGSKVIITTRNSDVASSRVESSEYIHDLSSGLS
WKKGWSLLCKKAFRKTAGYCPPELEEWAKKILKRCEGLPLAISAVATLLAKKPQTPVEWK
KLHESLGSEIRPDSSLSIISRVLQPSYMHLPSHLKICFLYFGMFPEDYSISRDRLIRLWL
AEGFVVPGRGQTMEEAAESYLNELIGRNLVHAPTREINGRVRSCRVLNLVREFIISKAEN
FITVLDPNCPISTRSSEKIRRLSIQNVNINLLRGRDFSHVRTLLVFGEECSPSELDNVFK
NSKFLRVLDFLGVPLKNFPDCVIGLPLLRYLCLSQTDIKSVPKFIGNLSFLQTLDLKGTQ
VTNLPKQIYALQDMRHLLVYSCDVTSGVAQGVQISAGNIGALSSLQKLFLIKVKKQRKVV
LKALGELIALRKLGLVDLEREHGRELCCSIQKMLELSTLDVRSTSEDEYLDLDQLNFPPG
PPRYLQRLCLTGRLESLPQWIPQLHSLARIALKWSKLNADVNSLEALQDLPNLVELELVG
YYTGDSMKFKAKKFTKLKVLRIEQLDQLDMVVVEDGAMPELKKLTLSRCQNLKLLPYGID
RLILLEELILYDMPEEFIARLQKDSEDRYLVENLRVIKSFYSGSTGCQNLS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacttgcaattcctttatcattgttggtggccgagaaggcgatgagcttgtgc
taccaaagaaacgcgtccaaggacccaagtaataatatccatgatgatgttgaaagagcc
tggaaatgtctaaggaggatgcaagcctatctaggggactcggaagagattgatgaaggc
agcctaatgcttcaaaatcgtgtcgcagaggtccaaagtctggcttatgaaatagaggat
gcccttgacaagttcatatctcagattccacatcatttccacagcaacatattctctcag
aagctgcacgacgttgcgcactatcgcgaagaaaagagagcaagagttgagttatccacc
aagattaaagacattgaaaagaaaattagttccttctcaactttggattcacttcttgag
ccaccaagtagttccagcacaaggaagagggatagtttgatccaccaagttcttgaggaa
gatgaaatagtaggccttgaggagcctaaagaaagactctccaaacagttgatggaagaa
gattcaaggctcaagactattttggttgtaggtcctggcggctccggcaaaaccacagtt
gtgaagaatgtttttgacagcacaatggtccaacggttttttgattgccatgcttggatc
gacttgtcacggcctcctaaagcagaagatcagaaagctgaactgatgcatctgaaggaa
aagagatttttggttgttttggataatgtttggacagcacaagatctggaactcattaca
aatgctttgccaagaggattgcctgggagtaaagtaatcataactactcgcaactctgat
gtagcttcttctcgtgttgagtcctccgagtatatccatgatttgagtagcgggttatca
tggaaaaaaggctggtctctactttgcaagaaggcttttagaaaaactgcaggatattgt
ccacctgaacttgaagagtgggctaaaaagatcctgaaaaggtgtgaaggtctgcccctt
gcaatttcagctgttgctactttgctggcaaagaagccacaaactccagttgagtggaag
aagttacatgaaagccttgggtctgaaattagacctgactctagtctttcgattattagc
cgtgtcttgcagccaagttacatgcatcttccgagccatctgaagatttgttttttgtac
ttcggcatgtttcctgaagactattcaatcagccgtgacaggctgattcggttgtggtta
gccgaaggatttgtggtgccaggaagaggacaaacaatggaggaggctgcagagagttat
ctgaatgaactcattggaagaaatttggtacatgctcccacaagggagattaatggtcga
gtaaggagctgtcgtgttttgaaccttgttcgagagttcatcatttcaaaagcagagaac
ttcatcacggttttggatccaaactgccctatttctactcgttcaagtgagaaaattcga
cgtctttcaattcaaaatgtcaatatcaatttattaaggggtagagactttagtcatgtt
cgtaccttactagtgtttggagaggagtgttccccttctgagcttgacaatgtgtttaag
aactctaagtttttaagggtgttagattttctaggtgtacctttgaagaactttcctgac
tgtgttattggtctccccctcttgaggtacttatgtctgagccaaactgatattaaatca
gttccaaagttcattggcaatctttcattcttgcaaaccttagatcttaagggcacacag
gtgaccaacttaccaaaacagatttatgcgctccaggatatgcgtcatcttttagtttat
agttgtgatgtgacttctggagtggcacaaggagttcagatttctgcaggcaatattgga
gctttatcttccctacagaagttatttctaattaaggtgaaaaaacaaagaaaagtagtc
cttaaagccttgggagagttaattgctctccgtaagttggggctggtagaccttgaaaga
gaacatggaagagaattgtgttgttccattcaaaaaatgctagagctttcaacacttgat
gtacgatcaacaagcgaagatgagtatcttgatttggatcaactgaacttccctcccggg
cctccccgctatctccaacgtctctgtttgacagggcgcctagaaagtctaccacagtgg
attccccagcttcacagtctagctcggattgctttgaagtggtctaaactgaatgctgat
gtcaactcactagaggcgctccaagatttgcctaatctggtagagctagagttggtgggc
tattacactggggattcaatgaagttcaaagccaaaaagttcacgaaactaaaggtatta
cgtattgagcaacttgatcagctagatatggtggtagtcgaggatggagcaatgcccgag
cttaagaagttaacattgtctagatgtcagaatctgaagttacttccatatggcattgat
aggcttatcttgcttgaagaattgattctgtatgacatgcccgaagaattcattgctagg
cttcagaaggatagcgaagaccgttacttggttgagaatcttcgagtcatcaaatctttc
tattctgggagcactggatgccaaaatctttcttga
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