Rosa chinensis (China rose): 112203743
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Entry
112203743 CDS
T06020
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112203743
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112203743
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
112203743
NCBI-ProteinID:
XP_024200434
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Position
5:36788738..36792625
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AA seq
370 aa
AA seq
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MKTFNVNQYGGVADGKTDNSKAFTDAWNQACQNNGGGVVLFQQGIYLVNPLVIEGSCKGP
MELQIQGTLLASREYQYSVGIDHWIVFRYIDNLVISGGGTFDGQGASSWPYNDCRKNPQC
KALPASLRFDFANNTKIDNITLINSKNTNIHLFAGLNVIISNINISAPADSPNTDGIKVG
SSSIVQIYDSIISTGDDCIAFLPESTNLNVTNVHCGPGHGISVGSISSNSITGLNVRNCS
FVGTQNGVRIKTKSPSQQGTVAQVTFENIEMDKVNNPIIIDQQYCASSGCSPRKTSEIQI
TDVKYNNIWGTSNTKIAVLLKCSENKPCQNIELRDIDLNYRGGKKPAKASCLNAKGVAYG
KQNPASCLQS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcaatgtaaaccaatatggtggtgttgcagatggaaaaactgataacagc
aaggcttttactgatgcatggaatcaagcttgccaaaacaatggaggtggtgtggtcttg
tttcaacaagggatatatttggtgaaccctttggttatagaaggctcttgcaagggaccg
atggagttgcagatccagggtaccttattggcttcaagggagtaccagtactcggttggt
attgaccattggatcgtcttccgatacattgacaacttagtaattagtggtggagggacg
ttcgatggccaaggagcctcttcttggccctataacgactgtcgcaaaaacccacagtgc
aaggcactgcctgcgtcattgaggttcgactttgccaataatacaaagatcgacaacata
actctcatcaacagcaagaacaccaacatccaccttttcgcaggtcttaatgtgataatc
agcaacattaacataagtgccccggccgatagccccaacaccgatggaatcaaagtcggt
agttcaagcatcgtccaaatatatgattctataatatccaccggagatgactgcatagct
ttccttcctgaatcaaccaaccttaacgttactaacgttcactgcgggcctggccatgga
attagtgtaggaagcatttccagtaactctattactggcttgaacgtaaggaattgcagc
ttcgtaggtactcagaatggtgttagaatcaagacgaagagtccctctcaacaaggaact
gttgcacaagttacatttgaaaacattgaaatggacaaggtcaataatcccatcatcatt
gatcaacaatattgcgctagtagtggctgtagtccacggaaaacttcggagattcagatt
actgatgtgaagtacaataacatttggggtacttcaaacacaaaaattgcagttttactc
aaatgtagcgaaaataaaccttgccagaacatcgagttgagggatatcgacctaaattac
agaggaggtaaaaaaccggcaaaagcatcgtgtttgaatgcaaaaggagtagcttacggc
aaacaaaaccctgcttcttgcctgcagagttaa
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