Rosa chinensis (China rose): 121048775
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Entry
121048775 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121048775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
121048775
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121048775
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
121048775
NCBI-ProteinID:
XP_024177135
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Position
1:65972001..65976513
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AA seq
714 aa
AA seq
DB search
MNFQQEKIVRFQDWNPEKPIDPPYSPNDGMQRGNFRTTFSSVSSKFQRRLESGSERIKKS
WKSYSIDGVVGKSFCSRVLDPQGQFLQKWNKIFVLACVIAVSLDPLFFYVPVIDDDNKCL
DKDRKMEITASVLRSFTDIFYVVHIIFQFRTGFIAPPSRVFGRGVLVEDAWAIAKRYLSS
YFLIDILAVLPLPQVVILIFIPKLGGSASLNTKNLLKFVVLFQYVPRVIRIYPLYREVTR
ASGILTETAWAGAAFNLFLYMLASHVLGAFWYLISLERETTCWKQACGMNSTICSRKDLY
CDTGGRHPNKTAFLNSSCPILEEDKTKFDFGIFLDGLQSGIVQSDTDFPQKFFYCFWWGL
RNLSSLGQNLETSTYVWEILFAVFISIGGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRD
AEQWMSHRLLPENLRERIRRYEQYRWQETRGVDEENLICNLPKDLRRDIKRHLCLALLMR
VPMFEKMDDQLLDAMCDRLKPVLYTEDSYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGF
FNSEYLKAGDFCGEELLTWALDPHTSPNLPISTRTVQALSEVEAFALKADDLKFVASQFR
RLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAETSS
PSLGATIYASRFAANVLRAVRLRRSGTRKGRVPERIPPMLLQKPAEPDFTAEEQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcagcaagagaagatagtcaggtttcaggattggaatccagagaaacctatt
gatccaccatattctccaaatgatggaatgcagcgaggaaatttcagaacaacatttagc
tcggtttcatctaaattccaaagacgcctggaatctggttctgagaggattaagaagtca
tggaagtcctattcgattgatggggttgttggtaaaagcttttgttctagagttcttgat
ccgcaagggcaattccttcaaaagtggaataagatatttgtattggcatgtgtaattgct
gtctccctggatcctttgttcttttacgtccctgtgattgatgatgacaataagtgcctt
gacaaggacagaaagatggagataacagctagtgttttgcgctcattcaccgacatattt
tatgtagttcatataatttttcaatttcgtactggatttattgctcctccttctcgagtt
tttggaagaggtgttttagttgaagatgcttgggctattgcaaagaggtatctatcctca
tacttcctcattgacattcttgctgtccttcctctcccacaggtggtcattttaattttt
attccgaaattgggaggctcagcatcattgaatacaaagaatttgttgaagtttgttgtt
ttgttccaatacgtgccaagagttattcgtatatatccattgtatagagaagtaacaagg
gcttctggcatacttacggaaactgcatgggcaggcgcggcatttaatcttttcctttac
atgcttgctagtcatgtacttggagcattttggtatttaatttctttagaacgagaaacc
acatgctggaaacaagcttgtggaatgaattcaaccatatgctcccgaaaggatttatac
tgtgataccggggggaggcatcctaataagacagcattcttaaattcttcatgcccaata
ctagaagaagataaaacaaaatttgattttggaatattccttgatggtcttcaatctggt
atcgttcagtcagacacagactttcctcaaaagttcttttactgcttttggtggggatta
cggaatttgagttcgcttggtcaaaatcttgaaacaagtacgtatgtttgggaaatcttg
tttgcagtcttcatttctattgggggcttggtgctattttcatttcttatcggaaatatg
cagacatatttgcagtctacaactacaagattggaggagatgagagtaaaaaggagagat
gcagaacaatggatgtcccaccgtttgctaccagagaatttgagagaacgcataaggcgg
tatgaacaatacagatggcaagaaaccagaggtgtagatgaagagaatttgatctgtaat
cttccgaaggaccttagaagggacataaagcgccatctctgcttggctctactaatgagg
gtgccaatgtttgagaaaatggatgaccaattgttggatgcaatgtgtgaccgtctcaag
ccagtactgtatactgaagacagctacattgttcgggagggagacccagtggatgaaatg
ctcttcataatgcgaggcaagctattgactatgaccacaaatggtggaaggactgggttc
ttcaattctgaatatctcaaggccggtgatttctgtggtgaagagcttctcacatgggct
cttgatcctcacacctctcctaatcttcccatctcaactagaactgtccaagcccttagt
gaagtcgaagcctttgctttgaaagcagacgatctgaagtttgtagcctcccaatttcga
cggcttcacagcaagcagctccgccacacattcaggttttactctcaacagtggaggact
tgggcggcttgctttattcaggcagcatggcgtcgttatagtaagaagaagcttgaagag
tctctgcgggaagaggagaataggttgcaagatgcacttgcgaaggcagagacaagctcc
cctagtcttggtgccaccatttatgcctcgcgattcgctgctaatgtacttcgcgctgta
cggctgcggcgcagtggtacacgcaagggaagggtgccagagagaataccgcccatgcta
cttcagaagccagcagagccggattttactgctgaagaacaatag
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