Rosa chinensis (China rose): 121048789
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Entry
121048789 CDS
T06020
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
121048789
Membrane trafficking [BR:
rcn04131
]
Autophagy
Other autophagy associated proteins
Others
121048789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_Vps41
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
BCAS3_WD40
Ge1_WD40
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
121048789
NCBI-ProteinID:
XP_024188902
LinkDB
All DBs
Position
3:5155548..5158565
Genome browser
AA seq
382 aa
AA seq
DB search
MATVSSPPFQFPVPKLDPEPDDSDPDPTRLPTIFNLSFNQDHACFAVGTDFGFRVYKCDP
FVITIRRDFFTGGGFGLVRILNTSQIFAIVGGGPDPVYPANRVMIWDDHKSLPIHDRSFR
SEVRGLKLRSDRLVVVLNQKIVVHSFPNSKPLHEILTAENPKGLCEVSQSPGPMVLACPG
LHKGQIRVENYALKRTKFIMAHDSSLACFGLTPDGRYLATASSKGTLVRVFSTSDGTLLQ
EVRRGADRAEIYSLAFSCTGQWLAVSSDKGTVHVFSVKVGSGSMEKDRSRGTSEGGVPNP
SGISSLSFIKGVLPRYFSSEWSVAKFHLQEGLQHIVAFGKRKNTIMIVGMDGSFYRCQFD
PVNGGEMTQLEYHNFLKPEETF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtctcctcccctccttttcagtttccggttcccaaactcgaccccgaaccc
gacgactccgaccccgacccgacccgactccccaccatcttcaacctctccttcaaccag
gaccacgcctgcttcgccgtcggcaccgacttcggcttccgcgtctacaagtgcgacccc
ttcgtcatcaccatccgccgcgacttcttcacaggcggcggcttcggattggtccggata
ctcaacacgtcccaaatcttcgccatagtcggaggcggacccgacccggtctacccggcc
aacagggtcatgatctgggacgaccacaagtccctccccatccacgacaggtcgtttcgc
tctgaggtcagggggctcaagctccggagcgatcgactcgtcgtcgttttgaaccagaag
atcgtcgtccacagcttccctaattcgaagcctctgcacgagattttgaccgcggagaac
cctaaggggctgtgcgaggtgtcgcagagtccgggtccgatggtgctggcgtgtccgggg
ctccataaaggtcaaattcgggtcgagaattacgctttgaagcggaccaagttcataatg
gcccacgattccagtctcgcctgctttgggctcactccggacggccggtatttggctacg
gcgagcagcaaagggactctagttagagttttcagtacttcggatggtacattactccaa
gaggtcaggagaggagcagacagagcagagatttacagtcttgctttctcttgtactggc
caatggctagctgtgtctagtgacaagggaactgtgcatgttttcagtgtaaaggttggt
tcaggatccatggaaaaggatagatcacgcggtacatcagaaggcggtgttcctaatcca
tcaggcatttcatctctgtctttcatcaaaggtgtgctgccaaggtatttcagctcagaa
tggtcggtggccaaatttcacttgcaggaaggtctgcagcatattgttgcctttggcaag
cggaagaacaccatcatgattgttggcatggatggaagcttctatcgatgccaatttgac
cctgtgaatggaggagaaatgacgcagcttgaatatcataacttcttgaagccagaagaa
actttctaa
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integrated database retrieval system
