KEGG T06020: 121048803

Rosa chinensis (China rose): 121048803

Entry

121048803         CDS       T06020

Name

(RefSeq) pre-mRNA-splicing factor CWC24-like

K22651

E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]

Organism

rcn Rosa chinensis (China rose)

Brite

KEGG Orthology (KO) [BR:rcn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    121048803
Enzymes [BR:rcn01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121048803
Ubiquitin system [BR:rcn04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121048803

SSDB

Motif

Pfam:

zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 Zn_ribbon_6 zf-RING_10 zf-rbx1 zf-Nse Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 Rtf2 zf-ANAPC11

Other DBs

NCBI-GeneID:

121048803

NCBI-ProteinID:

XP_024194059

LinkDB

Position

4:complement(38474190..38478838)

AA seq 221 aa
MASHTSEECSQKGKRPLTIDLNYPAPCEEVVLNTRFAWANSQQGQDEGHGRLAPQTSNDC
EVIDEDIAFISPVIYAQSKNSSRRNLEVRDVVATNTEMHSSHSDWGAQIAQIPLHCHKRK
RTLRNQAVLNWELHFSSDDGDKNKIEEVPSPELPESTPPQEIPSFSCPICLGPLSEETST
KCGHIFCKMCIEASIKVQHKCPTCRKKLRMKDTIRVYLPTK

NT seq 666 nt +upstreamnt +downstreamnt
atggcctcacacacttcagaggaatgttctcaaaaggggaagaggccactaactatagac
ctcaactatccagctccgtgtgaggaggtggttctaaataccagatttgcctgggccaat
agccaacaaggtcaagatgaaggacatggtcggttagcaccacaaacttcaaatgattgt
gaggtcattgatgaggacattgctttcatatccccggtgatatatgcccaatccaagaat
agttccagaagaaaccttgaggtgagggacgtcgtagctaccaatacagaaatgcatagt
agccattcagactggggtgctcagattgctcaaattccccttcattgccacaagcgcaaa
agaactttacgaaatcaagcagttttgaattgggagcttcactttagctcagacgatggt
gacaagaacaagatagaggaagtaccttctcctgagcttcctgagagcacaccacctcaa
gagataccttccttcagctgcccaatatgtttgggccctttaagtgaagaaacatcaaca
aaatgtggtcacatcttctgcaagatgtgtattgaagcatcaataaaagttcagcacaaa
tgcccaacttgtcgtaaaaagcttagaatgaaagacaccatcagggtgtaccttcctacc
aaatga

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