Rosa chinensis (China rose): 121049713
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Entry
121049713 CDS
T06020
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121049713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
121049713
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121049713
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121049713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
121049713
NCBI-ProteinID:
XP_040363642
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All DBs
Position
6:8988554..8990212
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AA seq
372 aa
AA seq
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MPRLRDSDSDDSRLIVSRFLDSEAEDSPDSEDLDSPLIHRRRFSDSDSDDNPLIRHPRFS
DSDDDDCVPLRFKRPRLVKKHRQSEGGEEEEIQGKNKDYIDFEAKETNEHRTGYRNPNIV
VTLSDPGLLDCPICFEPLTVPVFQCDGNGHLACSSCCAKIENKCPSCSCPIGSNRCSAIE
KVVDSSTTSCRNKKYGCAASVTYHKKNEHERTCAYSPSCSCPYLGCEFVSSVMELYRHYS
NNHGDSAIEFVSDNLFSISLRKYDKFVILRERDVGTLFILHNSVDDLGNVVSLSCIQPIF
KEGFIYKLVVRHRESDSLKLRSVTQSIRSLQAYPRPPSFLLIPREFFSLDSNCGHLEMDV
HIYMAEEEHDRF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccgagattaagagattcagattctgatgattcccgtttgatcgttagcagattctta
gattcagaagcagaagactctccagattcagaagatctggatagccctttgatccaccgg
cggagattctcagattcagattctgatgataaccctttgatccgccacccgagattctca
gattcggatgatgatgactgcgttccgctcaggttcaagagacctcgtcttgtaaaaaaa
catcgtcaaagtgaaggaggagaagaagaagaaattcaaggaaaaaataaagattatata
gattttgaagccaaagaaacaaacgaacacaggacaggttaccgtaaccctaatattgtg
gtaaccctaagtgacccaggactgcttgattgcccaatttgctttgaacccttgaccgtt
cctgtcttccagtgtgatggaaatggacatttagcttgctcatcttgttgcgccaaaatc
gaaaacaaatgcccttcctgttcctgccccattggatcgaaccgttgctcggccatcgag
aaggtcgtggactcaagcacaacttcttgccgaaacaaaaagtacggctgcgctgcttcg
gtgacttaccacaagaaaaatgaacatgaaaggacatgtgcatattcgcctagttgttct
tgcccctatttgggttgcgagtttgtctcatcagtcatggagttataccggcattacagc
aataatcatggggattctgcaatagagttcgtgagcgacaacttgttttccatttcattg
aggaagtatgacaagtttgttattcttcgagaacgggatgtaggtaccttattcattctt
cacaatagtgttgatgatcttggaaatgtggtcagccttagctgtattcaaccaatcttc
aaggagggcttcatctataaacttgtggttagacacagagaaagtgattccctcaaatta
cggtcagtgacacaaagcattcgaagcctgcaggcttatcctagacctcccagtttcctt
ctaatcccgcgtgagttcttctctttggattcaaattgcggtcacctcgagatggatgtg
cacatatatatggcagaggaagagcacgatagattctaa
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