Rickettsia conorii: RC0015
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Entry
RC0015 CDS
T00061
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rco
Rickettsia conorii
Pathway
rco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC0015 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rco03019
]
RC0015 (pcnB)
Enzymes [BR:
rco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RC0015 (pcnB)
Messenger RNA biogenesis [BR:
rco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RC0015 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AAL02553
UniProt:
Q92JQ2
LinkDB
All DBs
Position
complement(13579..14889)
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AA seq
436 aa
AA seq
DB search
MQVTHKILKIPSKGYRKILSLLNEKGQARLIGGCVRDALLDLLHNKTNKEEFEGDTERRI
AMYINVREDSSTGSTYKLPLEASYPRDRLEKGSCDIDIATNLTPSEVTNILSGAKIKTIP
TGLKFGTITATLNNEKFEITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINALSYCPF
KNEIYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKA
LKDGLKTLSRERIKSEMDKIIVSKRAAQILKAMFEIGILELIFSIQNYEIKFFEQANDFK
LELVTRYALLLYCQKDLNLKVFLDWKFSKHEAMQILSITNFLNDAKFNMKKIWFEKKNYK
EYLLAARIIGKLNHSQVKEFILKYDALLRPKFQVNGNDLLNMNIEKKKIGAKLEYLKNFW
IEQDFKPSKLELLAKL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttacacacaaaatactaaaaatcccctcaaaaggatatagaaaaatcttgagt
ctcttaaatgaaaaaggacaagcaagacttataggcggctgcgtacgtgatgcgttacta
gatctcttgcataacaaaactaataaagaggaatttgaaggagacacggaacgcagaatc
gcaatgtacataaacgtacgtgaggattcgagtaccggatcaacgtacaaattaccttta
gaagcaagttatccaagagatcgacttgagaaaggtagctgcgatatagatatagctact
aatttgacacctagtgaagtaacaaatattttatctggagctaaaataaaaactattccg
accggtttaaaattcggcacgattacggctactttaaataatgaaaaatttgagatcacg
actcttaggaaagatattgaatgtaacggcagacatgccaaagtaatattcaccaacgat
tttgccgaagatgccgcaagacgagattttactattaatgctttaagctattgtcccttt
aagaacgagatatatgattattttgaagggtttaaggatttgcagcaggaaaaggttgta
tttataggggaagctctagatagaattaaagaagattatttgcgaattctacgctttttt
cggttttctagctattatgcgaatcagcttgatgatggcaactttaaagcatgtaaagct
ttaaaagacggcttaaaaactttatcacgagagcgaattaaaagcgaaatggataaaatt
attgtttcaaaaagagcagcacaaattttaaaagctatgtttgaaataggaatattagaa
ctaatattctctatccaaaattatgaaataaaattttttgagcaggcaaatgattttaaa
ttagaattagttactcgatatgcactcttattatattgtcaaaaagatttaaatttaaag
gtctttctagattggaaattctcaaaacatgaagcaatgcaaatattatcaataacgaac
tttctgaatgacgctaaatttaacatgaaaaaaatttggtttgaaaaaaagaattataag
gaatatttattagcagctagaataatcggtaaattaaatcattcacaagtaaaagaattt
attcttaaatatgatgcgttattacgtcctaaattccaagtaaacggtaatgatttgtta
aatatgaatatagaaaaaaaaaaaataggagcaaaactagaatatctaaaaaatttttgg
atagagcaggattttaaacctagtaaattagagttgttggcgaaattatga
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