Rickettsia conorii: RC0212
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Entry
RC0212 CDS
T00061
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
rco
Rickettsia conorii
Brite
KEGG Orthology (KO) [BR:
rco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rco03032
]
RC0212 (hupA)
03036 Chromosome and associated proteins [BR:
rco03036
]
RC0212 (hupA)
03400 DNA repair and recombination proteins [BR:
rco03400
]
RC0212 (hupA)
DNA replication proteins [BR:
rco03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RC0212 (hupA)
Chromosome and associated proteins [BR:
rco03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RC0212 (hupA)
DNA repair and recombination proteins [BR:
rco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RC0212 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AAL02750
UniProt:
Q92J57
LinkDB
All DBs
Position
222017..222436
Genome browser
AA seq
139 aa
AA seq
DB search
MMYIIASCIYCFIKKHQYILTYQRRIDFIMSTHNTKEPKKMNKTEFIAFMTDHGHNHKHA
SHKTLTKAEAEKALNLVLDSVISAIKSHHNINITGFGSFEIHHRKAREGRNPKTGAKMKI
DAYNQPTFRAGRKMKEACN
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtatattattgccagttgtatatattgttttataaaaaaacatcaatacatatta
acctatcaaaggagaattgattttattatgagtacacataacacaaaagaaccaaaaaaa
atgaataaaaccgaatttatagcatttatgaccgaccatggtcataatcataaacatgct
tcacataaaacattaacaaaagctgaagccgagaaagcacttaatttagttcttgatagt
gtgattagtgctataaagagccaccataatattaatataacaggtttcggttcatttgaa
atacatcatagaaaagcacgtgagggtcgtaacccaaaaaccggagcaaaaatgaaaata
gatgcttacaatcaacctacttttagagccggaagaaaaatgaaagaagcttgtaattaa
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