KEGG   Rickettsia conorii: RC0309
Entry
RC0309            CDS       T00061                                 
Symbol
gyrB1
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rco  Rickettsia conorii
Brite
KEGG Orthology (KO) [BR:rco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rco03032]
    RC0309 (gyrB1)
   03036 Chromosome and associated proteins [BR:rco03036]
    RC0309 (gyrB1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rco02048]
    RC0309 (gyrB1)
Enzymes [BR:rco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RC0309 (gyrB1)
DNA replication proteins [BR:rco03032]
 Prokaryotic type
  DNA Topoisomerases
   RC0309 (gyrB1)
Chromosome and associated proteins [BR:rco03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RC0309 (gyrB1)
Prokaryotic defense system [BR:rco02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RC0309 (gyrB1)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 L_PA-C-like
Other DBs
NCBI-ProteinID: AAL02847
UniProt: Q92IW1
LinkDB
Position
310939..312927
AA seq 662 aa
MSDLFSFNKEKKNKLVDNNYSAKDIEVLEGLEPVRKRPGMYIGGTDSNAMHHLVSEVLDN
AMDEAVAGFASIITITMHHDHSITIFDNGRGIPIDNHPKFPDKSALEVILTTLHSGGKFS
NNVYHTAGGLHGVGISVVNALSKHLEIKVYKQGKLYSQSYSKGEKLTDLICEEASKRLRG
TSINFTPDPEIFSEKLHFNPKKIYELARSKAYLYRGVTIEWACEVEVQSDIPKKALISFP
NGLKDYLSSKITLDNLVIPGIFAGNIESKSDRIKLEWAICWQNNDSSAFVQSYCNTVPTP
QGGTHEQGLKSAILRGLKAYGEMIGNKKAANLTIEDILETASVVLSIFIAEPSFQGQTKE
KLVSNGVSKPVENIIKDHFDHFLSSDKALATNLLEHVISIAEFRISKKNEKNISRKNATQ
KLRLPGKLADCTRTSPEGTELFIVEGDSAGGSAKQARNRETQAVLPLWGKVLNVASSTLE
KIVNNQAIQDLEIALACGSLKNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPK
LVEEGHLYLAKPPLYRLTQSNKTYYAGDEEEKAKLMDKLLKASKAKIEVGRFKGLGEMMP
AQLKETTMHPEKRSLLKVTLADFQNVDKIVDDLMGKKPEKRFQFIYEQALVKMDKIISEL
DI
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgagcgatttattcagctttaacaaagaaaagaaaaataagctagtcgataataactat
agtgcaaaagatattgaagtattagaggggcttgagcctgttcgtaaaagaccggggatg
tatatcgggggtactgattcaaatgctatgcatcatttagtatctgaggtgctggataat
gctatggatgaagcagttgccggctttgcaagtatcatcacgataacaatgcatcatgat
catagtattactatatttgataacggtcgcggtatccctattgataatcatcctaaattt
cctgacaaatcagctttagaagtaattttaactactcttcattcaggaggtaaattctca
aataatgtttatcatactgcaggcggattgcatggtgttggaatatcggtagtaaatgct
ttatctaaacatttagaaataaaggtttataaacaaggtaaattatatagccaaagttat
tctaaaggagaaaaattaactgatttaatatgtgaagaagcatctaaaaggctaagaggt
acatcaataaatttcactcccgatccggaaatttttagtgaaaaattacattttaatcct
aaaaagatttatgagcttgcaaggtcaaaagcttatttatatcgcggtgttactatagaa
tgggcatgtgaagtagaagtacagtcagatatacctaaaaaggcattaataagtttcccg
aacggtttaaaagattatttaagttcaaaaataactttagataatttagttattccggga
atttttgcaggtaatatagagtctaagtcggacaggataaaacttgaatgggcgatttgt
tggcaaaataacgatagctcggcatttgttcaatcatattgtaatactgttccgactcct
caaggaggaacacatgagcaaggacttaagtcggctattttacgtgggcttaaagcatat
ggtgaaatgatagggaataaaaaagctgctaatctaactattgaggatattttagaaacc
gcaagtgtcgtactttctatttttatagctgagccgtcttttcaaggacaaactaaggaa
aaattagtatcaaacggtgtaagtaaaccggtcgagaatataataaaagatcattttgac
cattttcttagtagcgataaagctttagctactaatttacttgagcatgtaattagcatt
gctgagtttagaatcagtaagaaaaacgaaaaaaatatttcccgtaaaaatgccactcaa
aaattacgtttacccggtaaacttgccgattgcacacgcacttcacctgaagggacggaa
ttatttattgtagaaggtgattcggcaggaggctctgcaaaacaagcacgtaatagagaa
acgcaagcagtattaccgctatggggtaaagttctaaatgttgcgagttctacgcttgag
aaaatcgttaataatcaagcaatacaagatttagaaatagctcttgcctgcggtagttta
aagaattataaaaaagaaaatctgcgttacgaaaaaataattattatgactgatgcagat
gttgacggtgctcatatagcttcgttattaatgactttcttttttttacgaatgccgaaa
ttggtagaagaggggcatttatatctagctaagcctccgctttatcgtttaacgcagtct
aataaaacttattatgcaggcgatgaagaggaaaaagctaagttaatggataaattatta
aaagctagtaaagctaaaattgaagtaggtaggtttaaaggtctcggtgaaatgatgcct
gcacaattaaaggaaactactatgcatccggaaaaaagatcgcttttaaaggtaacttta
gcagattttcaaaatgttgataaaatagtagatgatttaatgggtaaaaagccggaaaaa
agatttcaatttatttatgaacaggctttagttaaaatggataaaattattagtgagcta
gatatttaa

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