Rickettsia conorii: RC0761
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Entry
RC0761 CDS
T00061
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rco
Rickettsia conorii
Pathway
rco03410
Base excision repair
rco03430
Mismatch repair
rco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RC0761 (recJ)
03430 Mismatch repair
RC0761 (recJ)
03440 Homologous recombination
RC0761 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rco03400
]
RC0761 (recJ)
DNA repair and recombination proteins [BR:
rco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RC0761 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RC0761 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RC0761 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AAL03299
UniProt:
Q92HL0
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All DBs
Position
complement(725054..726817)
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AA seq
587 aa
AA seq
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MKPQASINGKIWQQKLINEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLRPKIKNL
LPDPFHLLDMEKAVDRTVTAILNNQKICIFADYDVDGATSAALLKNIFRDLNILCDIYVP
DRIAEGYGPTPFAMQKIKDNGTELLITVDCGAMAHEALKYAKDVNLDVIVIDHHIATEIL
PDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSNLKKQNYFTQTMLQPNLMQYLDLV
ALGTVCDMMKLTGLNRAFVASGLKVMQQRHNIGIKTLYDMAGLHEIPKCYHLGFILGPRI
NAGGRVGKSSLGAHLLSTSCSNEANKLAKELEKHNNERKVIELLMIEEAMEIALTQQDSS
LLFIVKEGWHPGVIGIVAGKLKEKFDKPVAVIALNDGIGKASCRSILGIDFGAEIINAKS
KDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISITKLENYKHAEYDIDLTVNSVNF
PLMEELNTLEPFGQGNHEPIFKFDDLFVLKADIVGSKHIKCMLVPNKRGFGNKALSAIAF
NSVGTAFEDVLLSPKAKNIAVIGTLKTNNWQDNYTIQLIIKDILLKE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaagcatctataaacggtaaaatctggcagcagaaactgattaacgaagat
atagtcaccgagttatgtcgtagtttcaaaattagtgatttacttgctaggatagtatca
ttaagagtaaataatctagaggaagtagaaaatttcttgagaccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggaaaaggctgtagatagaactgttacagct
attttaaataaccaaaaaatatgtatctttgccgattatgatgtagacggtgctacttca
gccgctttacttaaaaatatttttagagatttaaatatactatgtgatatttatgttcct
gatcgtatagctgaaggatacggtccaactccttttgctatgcaaaaaattaaagataac
ggtacagaattattaattacggttgattgcggtgctatggcacatgaagccctaaaatac
gcaaaagacgttaaccttgatgttatagtaatcgatcatcatatagctacggaaatatta
ccggatgcagtagctatagtaaatccaaatcgtattgatgaaaaaagcgaatataaacat
ttggcagccgtaggagttgctttcttatttgcaactgcaatattatcgaatttaaagaag
caaaattatttcacgcaaacaatgcttcagcctaatctaatgcagtatctagatttagtg
gctcttggtactgtttgcgatatgatgaaattaacaggcttaaatcgtgcatttgttgca
agcggattgaaagtaatgcaacaaaggcacaatatagggattaaaacattatatgatatg
gcagggcttcatgaaataccaaaatgttatcatttagggtttattctaggtccgcgtatc
aatgcaggcggtagagtaggaaagtcaagtttaggtgctcatctcctatctactagttgt
tctaatgaagcaaataaattagctaaagaacttgaaaaacacaataatgagcgtaaagta
attgagttattaatgatagaagaagcgatggaaattgctttgacacaacaagatagtagt
ttattatttatcgtaaaagaaggatggcatccaggcgttataggaatcgttgccggcaaa
ttaaaagaaaaatttgataagccggtggcagttatagctttaaatgacgggattggtaaa
gcttcatgccgttctattttaggtattgattttggtgctgaaattatcaatgctaaaagc
aaagatttgctaatagcaggcggaggtcatgctatggcggcaggttttaccgtaacggct
gaaaaattacaagaattgcagaatttttttaataatgcttttagaattagtataactaaa
ctagaaaattataagcatgcggaatatgatattgatttaacggttaatagtgtgaatttc
cctttaatggaggaattaaacactttagagcctttcggtcaaggaaatcatgagcctata
tttaaatttgatgatttatttgtattaaaagcggatatcgttggaagtaagcatattaaa
tgtatgcttgttccaaataagcgaggctttggtaataaagccttatctgctattgctttt
aattcggtaggaactgcatttgaagatgttttattaagccctaaagcaaaaaatattgcc
gtaataggaacgttaaaaactaataattggcaagataattatactattcaattaattata
aaagatatacttctaaaagagtag
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