Rickettsia conorii: RC1329
Help
Entry
RC1329 CDS
T00061
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rco
Rickettsia conorii
Brite
KEGG Orthology (KO) [BR:
rco00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RC1329 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rco03021
]
RC1329 (rpoD)
Transcription machinery [BR:
rco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RC1329 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_ner
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Nrap_D6
Motif
Other DBs
NCBI-ProteinID:
AAL03867
UniProt:
Q92FZ8
LinkDB
All DBs
Position
complement(1232012..1233916)
Genome browser
AA seq
634 aa
AA seq
DB search
MSNSNIDNDLDKIDSLLKKAKSKKIPVTYDDINNALPLNKNPSIRQLEEAILKFSDAGVD
ILESNEDDEIKLDIGMDEEFKLSTNVDNEPEDEVEEENIGTTDDPVRLYLKDMGGVDLLT
REHEVEIAKRIEEGHKTMIASLCRSPIAMRCFIVWYEDLVNEKMLLRDLIDLEANMLHDE
TPENDEENSSETEGEEHEDNHLSMSRVETQILPNIIERMKKIAFICEELLIEAKKCYEKS
FEPKVLQNSKKYNNLELLINEVSEIHFNSKRTEEILGKMYGINRDLINKETAFLKLAEKY
GVTRQNFLDEYIGSVINAAWKEKMLKNKKVAWKELMTKESDYIDQMIAELSVIESKTGLL
VNDFKKLVNTIQKSERQTLQAKKDMIEANLRLVISIAKKYANRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKILRTSRQMLNEL
GYEPTATEIANRLSMPLDKVRKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPID
AAIQSNLREVTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESK
ALRKLQHPIRSKKLNSFRSGGKRGDGNSSDLLEA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagcaatatagacaatgatctagataaaatagatagtttacttaaaaaagct
aaatctaaaaagataccggtcacttatgatgatataaacaacgctcttcctcttaataaa
aatccttcaataagacaattagaggaagctatattaaaattttccgatgcaggagtagat
attttagaatctaatgaagatgatgaaattaagcttgatatcggaatggatgaagaattt
aagctatctaccaatgttgataatgaacctgaggatgaggtagaagaagaaaatataggt
actaccgatgatcctgtaagattatatcttaaggatatggggggagtcgatcttttaact
cgtgaacatgaagtagaaatagcaaaaaggattgaggaaggacataaaacaatgattgct
tccttatgtagaagccctattgctatgcgttgttttatagtatggtatgaagatttagtt
aatgaaaaaatgttactacgtgatctgatagatttagaagctaacatgttacatgacgaa
acacccgaaaatgatgaagaaaatagtagtgagaccgaaggagaagagcatgaggataat
cacttatctatgtctagagtagaaacgcagatattacctaatattatagagcgtatgaaa
aagattgcttttatctgcgaagagctactcattgaagctaaaaaatgttatgagaaatct
tttgagccgaaggttttacaaaatagcaaaaaatataataatttggaattattaataaat
gaagtttcggaaatacattttaattctaaaagaacggaagaaattttaggtaagatgtat
ggaataaatcgtgatttaattaataaagaaacagcttttttaaaacttgctgaaaaatat
ggagtaactcgccaaaatttccttgatgaatatataggatcggttatcaatgcagcatgg
aaagaaaaaatgctgaaaaataaaaaagtcgcttggaaagagttaatgactaaagaatcg
gattatatagatcaaatgattgctgaattatcggttatagaatctaaaaccggtctttta
gttaatgattttaaaaaactagtgaatactatacaaaaaagcgagagacaaacgctacaa
gcaaaaaaagatatgatagaagcgaatttacgtttagttatatctattgctaaaaaatac
gctaatagaggattgcagtttttagatttaattcaagaaggtaatataggacttatgaaa
gcggtggataaatttgaatatcgccgtggttataaattctctacctatgctacgtggtgg
attagacaagctataacaagagctattgccgatcaagcaaggactatacgtattcctgtg
catatgattgaaacaattaataagatactacgtacttcaagacaaatgcttaatgaactc
ggatacgaaccaacagcaacggaaatcgctaaccgtctttcaatgccgcttgataaagtg
cgtaaagtcatgaaaatagctaaagaacctataagtcttgagaatcccgtaggtgatgat
agtgacggcggtcaattaggcgattttatcgaagataagaatgcagtagcaccgattgat
gcggcaattcagtcaaatttacgagaagttaccactagagtacttgcaacccttacgcct
cgtgaagaaagagtgcttagaatgcgtttcggtataggtatgaatactgaccatacatta
gaagaagtagggcagcaatttaaagtaactagagaacgtataagacaaatcgagtcaaaa
gctttaagaaagttacaacatcctattagatccaaaaaacttaatagctttagaagcgga
ggaaagcgtggtgacggtaattcatcggatttactagaagcatga
DBGET
integrated database retrieval system
