Rickettsia conorii: RC1336
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Entry
RC1336 CDS
T00061
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau chains
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rco
Rickettsia conorii
Pathway
rco03030
DNA replication
rco03430
Mismatch repair
rco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RC1336 (dnaX)
03430 Mismatch repair
RC1336 (dnaX)
03440 Homologous recombination
RC1336 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rco03032
]
RC1336 (dnaX)
03400 DNA repair and recombination proteins [BR:
rco03400
]
RC1336 (dnaX)
Enzymes [BR:
rco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RC1336 (dnaX)
DNA replication proteins [BR:
rco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RC1336 (dnaX)
DNA repair and recombination proteins [BR:
rco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RC1336 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_30
AAA_19
AAA_18
AAA_assoc_2
RNA_helicase
TIP49
AAA_16
Viral_helicase1
AAA_17
PMBR
DUF3646
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAL03874
UniProt:
Q92FZ1
LinkDB
All DBs
Position
1239738..1241267
Genome browser
AA seq
509 aa
AA seq
DB search
MLDINSSNQYIPFARKYRPSNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTT
SARIIAKAVNCSALITENTTIKTCEQCTNCISFNNHNHPDIIEIDAASKTSVDDIRRIIE
SAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHIIFIFATTEVQKIPATIISR
CQRYDLRRLSFEEIFKLLEYITKQENLKTDIEALRIIAYKSEGSARDAVSILDQAASMSV
KSDNIISPQVINQMLGLVDSSVIIEFVECIIYRETEKAINLINKLYGSSVNLEIFIESAS
DFIAYLNKVKMLPNYSLPIYESFNDRTKNILDKTSLPHLSILWQIYNKGVGEIKISYNQL
TETEMLVIKSIYSTSLPLLTDFDGNNQNLNQSINPEIKKKFEIVDFLEYLYKNNEIDIYY
FLLNHTELKNLSNNRLEFVSLEVTSKIKRQIDDLLAAFTNEKFEIVIIKEQNKQTLKNQL
IGKIEASNDFGLIKKHFPNITISDILLKS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctagatataaattcatcaaatcaatatattccttttgcaaggaaatatcgtcctagt
aactttgccgagcttcaggggcaagaggtattagtcaaagttttaagctatactatttta
aacgataggctcgccggaggctatcttttaacaggtattagaggagtcggtaaaactact
tccgcccgaattattgctaaagccgtcaactgttctgctttaattaccgaaaatacgact
attaaaacatgcgagcaatgtacgaattgcatcagctttaataatcataatcaccctgat
ataatcgaaattgatgcggcaagtaaaactagcgtagatgacatacgtagaattatagaa
tccgccgagtataagcccctacaaggtaagcataaaatcttcattattgatgaggtgcat
atgctctctaaaggggcatttaatgcacttcttaagacactggaagaaccaccacctcat
ataatatttatctttgcaacgacggaagtacaaaagatacctgcaactattatctcaaga
tgtcaacgttatgatttaaggcggttgagttttgaagagatttttaagctacttgaatat
ataactaagcaagaaaatttaaaaaccgatatagaagcactaagaattatagcttacaaa
tcggaagggtcggcacgtgatgcagtctctattttagatcaagcagctagtatgtcggtg
aaatctgacaatataattagtcctcaagtaattaatcaaatgcttgggcttgtcgatagt
tcggttataatagaatttgtcgaatgtattatctacagagagacggaaaaagctataaat
ttaataaataaactttacggttcttcggttaatcttgagatttttatagaatcggcatca
gattttattgcttatcttaataaagtaaaaatgttacctaattatagtttgcctatatat
gaatcatttaatgatagaactaaaaacatattagataaaaccagcttgccgcacttatca
atcttatggcaaatatataataagggagtaggggaaataaaaatttcctataaccaacta
acagaaacggaaatgttagttataaaatctatatattcgacgtcactacccttgcttaca
gattttgacggtaataatcaaaatttaaatcaatcaattaatccggaaataaaaaaaaaa
tttgaaattgtagattttcttgaatatttatataaaaataatgagatagatatatattat
ttcctgctcaatcatacggaacttaaaaatctcagtaataatagattagagttcgtaagt
cttgaagttacaagcaaaataaaaagacaaatagacgatttgttagctgcttttactaat
gaaaagtttgagatagtaataataaaagagcagaacaagcaaaccttaaagaatcagtta
attggtaagattgaagcaagtaacgattttggtttaattaaaaaacatttcccaaatata
acaatttcggatattttacttaaaagctaa
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