Ruegeria conchae: K3740_02560
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Entry
K3740_02560 CDS
T08595
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rcon
Ruegeria conchae
Pathway
rcon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3740_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcon03021
]
K3740_02560
03400 DNA repair and recombination proteins [BR:
rcon03400
]
K3740_02560
Enzymes [BR:
rcon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3740_02560
Transcription machinery [BR:
rcon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3740_02560
DNA repair and recombination proteins [BR:
rcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3740_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
UWR03608
LinkDB
All DBs
Position
507402..508418
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDGKPGNDPARQATLVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSINAKGPAVVTAGDISE
SAGIEVLNRDHVICHLDDGADLFMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTLKIDTDGSITPEDALAFAARILQDQLSIFVNFDEPESAG
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaattgggcagaattgatcaagccgacccagcttgacggcaagccgggc
aacgaccccgcgcgtcaggcaaccctggttgctgagccgctggagcgtggctttggtctg
actctgggcaacgcgctgcgtcgcgttctgatgagctcgctgcaaggcgcggccatcacc
agcgttcagatcgacaacgtcctgcacgagttctcctcggtcgcgggcgttcgtgaagac
gtcaccgacatcatcctgaacctcaagggcgtatccctgcgcatggaagttgaaggcccc
aagcgcctgtcgatcaatgccaaaggccctgccgttgtcaccgcaggtgacatcagcgaa
agcgccggcatcgaggttctgaaccgcgatcacgtcatctgccacctcgacgatggcgct
gatctgttcatggaactgaccgtcaacaccggcaaaggctacgtctcggctgagaagaac
aagcccgaagatgcaccaatcggcctgatcccgatcgacgcgatctattcgccggtcaaa
aaggttgcctatgacgttcagccgacccgcgaaggtcaggttctggactatgacaagctg
accctaaagatcgacaccgacggttcgatcacgccggaagacgcgctggccttcgccgca
cgcatcctgcaggatcagctgtcaatcttcgtcaacttcgacgagccggaatcggctggc
cgccaggacgaagacgatggtctggagttcaacccgcttctgctgaagaaagtggacgag
ctggaattgtctgtccgttcggcaaactgcctgaagaacgacaacatcgtctatatcggc
gatctgatccagaaaaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtccggcatgggtctgcacctcggcatggatgtcgag
gactggccgcccgacaacatcgaagatctggcgaagaaattcgaagacgcgttctaa
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