Ruegeria conchae: K3740_05275
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Entry
K3740_05275 CDS
T08595
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00470
D-Amino acid metabolism
rcon00550
Peptidoglycan biosynthesis
rcon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K3740_05275 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K3740_05275 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rcon01011
]
K3740_05275 (murD)
Enzymes [BR:
rcon01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
K3740_05275 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rcon01011
]
Precursor biosynthesis
Amino acid ligase
K3740_05275 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UWR04107
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Position
1053468..1054862
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AA seq
464 aa
AA seq
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MIPVKGFSGKKVAVLGLGRSGLATARALQAGGAQPVCWDDNPAAREAAEGEGLVCSDLRR
HGAFENIATLIVSPGIPHLYPTPNPVVAAATDAGVPVDNDIGLFFRSFAGPEWHNYDTPP
RVIAVTGSNGKSTSAALIHHILTEAGRDSQLAGNIGRGVLDIDPGGDGSVVVLELSSYQT
ELARALTPDVAVFTNLSPDHLDRHGGKGGYFAAKRRLFAEGGPDRAVIGIDEAEGAFLAG
QLAEGPSDDRVIRISVARKLTGPGWQVFARKGYLSEYRKGRQTGSIDLRDIKGLPGAHNH
QNACAAYAACRSLGLAPRVIEDALHSFPGLPHRSQIIAEADGVTFVNDSKATNVDSALKA
LSAFKKVRWICGGLEKEGGLEALNGVEGHVIKAYVIGREAAGFAMQLTADAQVCTTMAAA
VEQAMADAQPGEVVLLAPAAASFDQYDNFEQRGDDFTAEVKKRL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaaagggttttcagggaaaaaagttgcggttctggggctagggcggtct
ggtttggccacggctcgtgcattgcaggcgggcggcgcccaaccggtgtgctgggatgac
aatccggccgcgcgcgaggcggctgaaggagaggggctggtctgctctgatctgcgccga
catggagcgttcgaaaatattgctaccctgattgtttcacctggtattccgcatctttat
cccacgcccaacccggtggtggctgctgcaacggatgctggcgtcccggtagacaatgat
attggtttgttctttcgctccttcgccgggcctgaatggcacaactatgacaccccgccg
cgtgtcattgcagtgacgggatcgaacggcaaatcaaccagtgcagccctgatccaccat
atcctgaccgaggccgggcgcgactcgcagttggcgggcaatattgggcgcggtgttctg
gatatcgatccgggcggtgatggctcggtggtggtgttagagctgtccagttatcaaact
gaactggcccgcgccctgacgccagatgtggcggttttcaccaatctctcacctgatcat
cttgaccggcatggaggtaagggtggctatttcgcagccaaacgccgcctctttgccgaa
ggcgggccggatcgcgccgtgatcgggatcgatgaggctgaaggcgcgtttttggctggt
cagctggccgaggggccgtctgatgatcgggtgatccgcatttcggttgcgcgtaaactg
actggaccgggctggcaggtttttgcacgcaagggatacttgtctgaataccgcaaggga
cgtcagacgggatcaattgatctgcgcgacatcaagggcttgccaggcgcgcataaccac
cagaacgcttgtgctgcctatgctgcctgccgttctctgggcttggccccccgcgtgatc
gaagacgcgctgcatagttttcctggtctgccgcatcgcagtcaaatcattgccgaagcg
gatggggtaaccttcgtgaacgactctaaggccaccaatgtggacagcgccttgaaagcg
ctgagcgccttcaaaaaggttcgctggatctgtggcgggcttgagaaagagggtgggctt
gaggcgctgaacggggtcgaaggtcacgtgatcaaggcctatgtcattggacgcgaagct
gcgggttttgccatgcagctaactgcggatgctcaggtttgcaccactatggctgccgct
gttgaacaggccatggcagacgcgcagccgggcgaggtggtcttgttggcccctgcagcg
gccagtttcgaccaatatgacaatttcgaacagcgcggtgatgacttcaccgccgaggtg
aaaaaacgcctctga
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