Ruegeria conchae: K3740_05490
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Entry
K3740_05490 CDS
T08595
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00260
Glycine, serine and threonine metabolism
rcon00460
Cyanoamino acid metabolism
rcon00630
Glyoxylate and dicarboxylate metabolism
rcon00670
One carbon pool by folate
rcon00680
Methane metabolism
rcon01100
Metabolic pathways
rcon01110
Biosynthesis of secondary metabolites
rcon01120
Microbial metabolism in diverse environments
rcon01200
Carbon metabolism
rcon01230
Biosynthesis of amino acids
rcon01240
Biosynthesis of cofactors
rcon04981
Folate transport and metabolism
Module
rcon_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K3740_05490
09102 Energy metabolism
00680 Methane metabolism
K3740_05490
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K3740_05490
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K3740_05490
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K3740_05490
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K3740_05490
Enzymes [BR:
rcon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K3740_05490
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UWR04147
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All DBs
Position
complement(1100273..1101568)
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AA seq
431 aa
AA seq
DB search
MNANLRDTGFFTQSLADRDPELFGSITSELGRQRDEIELIASENIVSAAVMEAQGSVMTN
KYAEGYPGRRYYGGCQFVDIAENLAIDRAKQLFGCEFANVQPNSGSQANQGVFQALIKPG
DTILGMSLDAGGHLTHGAAPNQSGKWFNAVHYGVRKQDNLIDYDQIEALAKEHQPKLIIA
GGSAIPRIIDFARMREIADMVGAYLHVDMAHIAGLIAAGEHPSPFPHAHVATTTTHKTLR
GPRGGMILTNDEAIAKKVNSAIFPGIQGGPLMHVIAGKAVAFGEALRPSFKDYIKQVIVN
AQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPE
KPTITSGIRLGSPAGTTRGFGEVEFRQIADWIIEVVDGLAANGEEGNAAVEAKVKAEVAD
LCAKFPIYPNL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatcttcgtgataccggtttcttcacccaatcccttgccgatcgtgacccc
gagctatttggctcgatcacatccgaattgggccgccagcgcgatgaaatcgagctgatc
gcatcggaaaacatcgtctctgccgctgtcatggaagcgcagggctcggtgatgaccaat
aaatatgccgaaggttatccgggccgccgttactatggcggatgccaattcgtcgacatt
gccgaaaatctggctatcgatcgggccaagcagctgttcggctgtgagttcgccaatgtc
cagccaaactcgggctcgcaggcaaaccaaggggtgttccaggcgctgatcaaacctggc
gacacgattctgggtatgagcctggatgccggcggtcacctgacccacggtgcagcccca
aaccaatcgggcaaatggttcaatgcagtccactatggcgtgcgcaagcaagacaatctg
atcgactatgatcagatcgaagcgctggccaaagaacaccagcccaagctgatcatcgcg
ggcggttcggccattccgcgtattatcgattttgcccgcatgcgcgagatcgccgatatg
gttggtgcgtacctgcacgtggatatggcccatatcgcaggactgattgcggcgggtgag
cacccctcgcccttcccgcacgcgcatgtcgcgacaaccaccacgcacaagacgctgcgc
ggcccccgtggcggcatgatcctgaccaacgacgaagcgatcgcgaaaaaggtaaactcg
gcaatcttccccggtattcagggtggtccgctgatgcatgtgatcgctggcaaagcagta
gcgtttggcgaggcgctgcggccctcgttcaaggactacatcaagcaggttatcgtgaac
gctcaggccctttcagatcagttgatcaagggcggtctcgacaccgtgacccacggcacc
gacacccatgttgttctggtcgacctgcgccccaaaggcgttaagggtaatgcgaccgag
aaagcattgggtcgtgcgcatatcacctgcaacaagaacggcgttccgtttgaccccgaa
aagccaactatcaccagcggcatccgccttggttctcctgctggcacgacacgaggtttt
ggagaagtcgagttccgtcaaatcgcagattggatcatcgaagtcgtcgatggtctggcc
gccaatggcgaagaaggcaatgccgcagtcgaagcaaaggtcaaagccgaggtcgcagac
ctctgcgccaagtttccgatctatccgaacctgtaa
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