Ruegeria conchae: K3740_07045
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Entry
K3740_07045 CDS
T08595
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rcon
Ruegeria conchae
Pathway
rcon03030
DNA replication
rcon03430
Mismatch repair
rcon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3740_07045
03430 Mismatch repair
K3740_07045
03440 Homologous recombination
K3740_07045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcon03032
]
K3740_07045
03400 DNA repair and recombination proteins [BR:
rcon03400
]
K3740_07045
Enzymes [BR:
rcon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3740_07045
DNA replication proteins [BR:
rcon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K3740_07045
DNA repair and recombination proteins [BR:
rcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K3740_07045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
LisH_PAC1
Motif
Other DBs
NCBI-ProteinID:
UWR04434
LinkDB
All DBs
Position
complement(1411979..1413391)
Genome browser
AA seq
470 aa
AA seq
DB search
MLHKLSLRLRIFLFFCLLALGGILVSTVVLWISYERAADPALINAFIFADALIAFGLLGL
VAGVWLLFDDNVAKPIERLSAQLRARAHAGVSTDLDLQAARYLGDLAPAAAGLAEQLAEN
AMTTAQAVAAETAHLAAEKKRLTALLTEIPVAMLLASPKHQIVLYDAQAAGVLAQIAHPR
LNASLFDYLESTGLTDAYKEMCKTGMDVYCTLSSVDGRQTYTARMKPLGDAPGYMLVFEG
SIARIPPEDARPLVYDFELLDTPGDDVFEERSLSDLCFVVFDTETTGLLPHKDEIVQIGA
VRVVKGKIVEGEKFDTLVDPGIPIPPASTKVHKVNDRMVQGAPDIAGAGQSFHQFARDAV
IVAHNAPFDMAFLRRHADRMEVDWSHPILDTVLLSAVLFGASETHTLDAVCDRLGVTIPE
TLRHTALGDAVATAEALVRMLPMLKARGMTTFGDVIAETRKHGRLLEDLN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacaagctaagcctacgcctgcgcatcttcctgtttttttgtctgctggccttg
ggcgggatacttgttagcacggtggtcttgtggattagctatgaacgtgcggccgacccg
gcactgatcaatgcatttattttcgcggatgcgttgatcgccttcggtttgctcggactg
gtcgcaggtgtctggctgttgttcgatgataacgtggctaaaccgatcgaacgtctttcc
gcgcaacttcgggcccgcgcccatgcaggggtcagcacagatctcgatttgcaagctgcg
cggtatctgggtgatcttgccccagcggccgcggggctggcagagcagctggccgaaaac
gccatgaccactgcccaggccgtcgcagcggaaaccgcccatctggcggctgagaaaaaa
cgcctcaccgccctgctgaccgagatacccgtcgccatgcttctggcaagcccaaagcat
cagatcgttctgtatgacgcgcaggccgccggggtattggcccagatcgcccacccccgc
ctgaacgcatctttgtttgactatctcgaaagcactggcctcaccgatgcctacaaagag
atgtgcaagaccggcatggatgtctattgcactttgtccagcgttgatgggcggcaaacc
tataccgcgcggatgaaaccgctgggtgacgctccgggttatatgctggtctttgaaggc
agcattgcccgcattccgcccgaggatgcccgccctctggtctatgatttcgagctgctc
gacacacccggggatgacgtctttgaggaacgcagcctgtcggacctgtgtttcgtggtc
tttgacactgaaacgactggcttgttgcctcataaagacgagatcgttcagattggagcc
gtgcgggtggtaaagggcaagattgtcgagggtgagaagttcgacacgcttgtcgatccg
ggtataccgatcccgccagcctcgaccaaagtccataaggttaacgacaggatggtgcag
ggtgcgcccgacatcgccggggccgggcaaagctttcaccaattcgcccgtgacgctgtg
attgtcgcccataacgcaccattcgacatggctttcctacgccgtcatgccgaccgtatg
gaggtagactggtcccaccccattcttgacactgttttgctgtcggctgttcttttcgga
gcaagcgaaacccacacactggatgcggtttgtgatcggctgggtgtaaccatacctgaa
accctacgccatactgctctgggcgatgcggttgccactgccgaggctctggtccgaatg
ttgccaatgcttaaggcacgcggcatgacaacctttggcgacgtaatcgcggaaacccgc
aaacacgggcggttgctggaggatctgaactag
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