Ruegeria conchae: K3740_07345
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Entry
K3740_07345 CDS
T08595
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rcon
Ruegeria conchae
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcon03400
]
K3740_07345
Enzymes [BR:
rcon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K3740_07345
DNA repair and recombination proteins [BR:
rcon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K3740_07345
Prokaryotic type
K3740_07345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UWR04492
LinkDB
All DBs
Position
1482514..1483947
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AA seq
477 aa
AA seq
DB search
MDSGRSPIILWFRRDLRLSDHPALTAALRSGRPIVPVFILDDQVQALGAAPKWRLGLGLE
AFAMTLDQIGSNLILRRGTALKVLQGLIHETGAGAVFWSREYDPKAINRDMHIKASLNEQ
GIEVRSFAGHLLFEPWTIVTKAGQPFRVFTPMWRSVSGRDVAMPEPTAARIAKPDLWPAS
DRLSDWKLDQEMQRGATIVRPFVRPGEAAALDQLDRFLENIDQYQEARDRLDQVGTSDLS
EHLSLGEIGPRTIWHRVQNADRTGSRGGEAFLRQLVWREFAYHLMYHWPHLLTDNWKPEW
DAFPWNTDPDTPEVRAWKLARTGVPLVDAGLRQMYVTGRMHNRARMIVASYLTKHLMTHW
KIGADWFADCLIDWDPAANAMGWQWVAGSGPDAAPYFRIFNPETQRERFDPHSDYLNRWI
AEGRSDPSPTARAYFSAIPRSWGLCQEDSYSAPVVGLKEGRIRALDAYETRKVPVRN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggattccgggcgttctccgatcattttatggttcaggcgcgatctgcgattaagtgat
catccggcgttgacggcggcgttacggtcgggtcgcccgattgtacccgtatttattctg
gacgatcaggttcaagcattgggcgcagcgcccaaatggcgtctgggtttgggtcttgag
gcttttgcaatgacccttgatcagatcggcagcaatctgatcctgcgccgggggactgcg
ctgaaagtcctgcaaggtctgatacacgaaaccggagcaggagctgtattttggtcgcga
gagtatgacccgaaggcgatcaacagggacatgcatatcaaggcgagcttgaacgaacag
gggatcgaggtgcgatcctttgcagggcatcttttgttcgaaccttggacgattgtgacc
aaagcggggcaaccgtttcgtgtatttactccgatgtggaggtcggtgagcggacgagat
gttgcgatgccagaaccgactgctgcacgaattgccaagccagatctttggcctgcttct
gatcggctgtccgattggaaactggatcaggagatgcagcgtggcgcgacgatcgtacga
ccgtttgtccgtcctggagaggctgcggctttggatcagttggataggtttctggaaaat
attgatcaatatcaggaagcgcgagatcgattggatcaggttggtacgtctgatctttca
gaacacctctcgttaggcgaaatcgggccgcgcacaatatggcaccgggtgcaaaacgcg
gatcgcactggttcgcgcgggggcgaggcctttctacggcagcttgtttggcgtgagttc
gcttatcacctgatgtaccattggccgcatctcctgaccgacaattggaaacctgaatgg
gatgcgtttccgtggaatactgatcccgacacgccagaagtccgcgcgtggaagttggcc
agaactggggtgccgctagtcgatgcggggctaaggcagatgtacgtgaccgggcggatg
cataatcgtgcacggatgattgtggcgagttatctaaccaagcatctgatgacgcactgg
aaaattggtgctgattggtttgccgattgcctgattgattgggacccagccgcaaacgcg
atgggatggcagtgggtggcgggttccgggccagacgcagccccgtatttccgtatcttc
aacccagaaacacagcgcgagcgatttgatccacattcggattatctgaatcgttggatt
gctgagggtcggtctgacccgtccccaaccgcacgcgcctattttagtgccataccgcgg
tcttgggggctttgtcaggaagacagctacagcgctccagtggtagggctgaaagaaggt
cgcatccgagcattggacgcgtatgaaaccagaaaagttccggtaaggaactga
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