Ruegeria conchae: K3740_08245
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Entry
K3740_08245 CDS
T08595
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00061
Fatty acid biosynthesis
rcon00071
Fatty acid degradation
rcon01100
Metabolic pathways
rcon01212
Fatty acid metabolism
rcon02024
Quorum sensing
rcon04146
Peroxisome
Module
rcon_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K3740_08245
00071 Fatty acid degradation
K3740_08245
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K3740_08245
09145 Cellular community - prokaryotes
02024 Quorum sensing
K3740_08245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcon01004
]
K3740_08245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcon04147
]
K3740_08245
Enzymes [BR:
rcon01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K3740_08245
Lipid biosynthesis proteins [BR:
rcon01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K3740_08245
Exosome [BR:
rcon04147
]
Exosomal proteins
Exosomal proteins of breast milk
K3740_08245
Exosomal proteins of breast cancer cells
K3740_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Lipoprotein_22
SH3_2
Motif
Other DBs
NCBI-ProteinID:
UWR04654
LinkDB
All DBs
Position
complement(1660411..1662297)
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AA seq
628 aa
AA seq
DB search
MDASPLPPQITINGVQFNATPGQRPLRVDGCVTICELFQKRFAELGSRTAHREKDFGIWK
SYSWADYWQHARWIGLALRKLGLQRGEVVSILSEDRKEWAWFDMGIQCVGGIASGVYTTD
SAAQLKYLINDSGSRFLIVEDEEQLDKFLEVEEQLPDLLKVIILEDEGLHDLDHPRCMMI
GDLYALGRQAEAEEPGAFESEIAAATPQDTALLIYTSGTTGNPKGAMLSHENIMAAIEAG
AHSLPSQSTDEQLCFLPLCHILERDVSIYYPLAMKSTVNFAESPETVFANLQEVSPATFT
AVPRVWEKIYSQVMFMAKEATPTGRFAFVQALKAGTARADYILTGKPVPSPVAMRFWFWD
RLVLRNLRRMLGLDRLRRGGSGAAPISPDLLRWYWAIGVPIVEGFGMTETAGIAALNTLG
VNKIGTIGMPVPGNDMRISDDGEIQVKGLNIFQGYWRNNAKTAESFTCDGWLRTGDMGHI
DEDGFVTITGRLKDIIITAGGKNITPAEIESGLKFSQYISDAVIIGDRRKYLTALIMIDQ
ENVEKFAQERKIPFSNFASLCAASEVTELIGAEIKAVNKEFARVEQIKDFRLIDVLLTAE
DEELTATMKLKRGLVEKKHAHLIEDMYN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaagccccctgccccctcagatcacgatcaacggcgtgcagttcaacgcgacg
cccgggcagcgcccgctgcgggtcgatggttgcgtgacgatttgcgagctgttccaaaaa
cgttttgccgagttgggatcacgcacagcgcatcgtgaaaaggatttcggcatctggaaa
tcctattcatgggccgactactggcagcacgccagatggatcgggctggccctgcgcaag
ttgggcctgcaacgtggcgaagttgtgtcaatcctgtccgaagaccgtaaggaatgggca
tggttcgatatgggcatccaatgcgtcggagggatcgcctctggcgtctacaccacggat
tcagctgctcagctgaaatatctgatcaacgacagtggtagccggtttctgatcgttgaa
gacgaagagcagttggacaagttcctcgaggtagaagagcaacttccagatttgctcaag
gtcattatccttgaagacgaaggcctgcacgatctcgaccatccgcgttgtatgatgatt
ggggacttgtacgctctggggcggcaggctgaggccgaagaacctggcgcattcgaatcg
gagatcgctgcggccacgccacaagacactgccttgctcatctatacttcgggcaccacc
ggcaatcctaagggcgccatgctaagccatgaaaacatcatggcggcgatcgaagctggc
gcccattccctgccttctcagtcgaccgacgaacagctatgttttctaccgctctgtcat
atcctcgagcgcgatgtgtcgatctattacccactggcgatgaaaagcacagtgaatttc
gccgaaagccccgaaacggtattcgccaacctgcaagaagtctctcccgccacctttacc
gccgttccacgagtgtgggagaaaatctactcgcaggtcatgttcatggcaaaagaagcc
acgccgaccgggcgtttcgcctttgtgcaggcgctcaaggcgggcacggcgcgggctgat
tacatccttacgggcaagcccgtgccctcgccggtcgcaatgcggttctggttctgggat
cggctagtactgcgcaacctgcgccggatgctgggcctagaccggcttcgtcggggtggt
tctggtgcagcgccgatctctcctgatctgcttagatggtattgggctatcggcgtacca
attgtcgaagggttcgggatgaccgagactgccggcatagcggcgttgaacacgcttggg
gtcaataagattggcaccattggaatgccagtgcccggcaacgacatgcgtatttcggat
gatggggaaattcaggttaaaggtctgaacatttttcagggctactggcgcaacaatgcc
aaaacggctgaaagcttcacttgcgacggctggctgcgcaccggggatatggggcatatc
gacgaggatggctttgtcaccatcacaggtcgcctcaaggacatcatcatcactgcgggc
ggcaagaacatcacgcccgccgagatcgagagtggattgaagttcagccagtacatctcg
gacgcggtaatcatcggggacaggcgtaagtatttaactgctctgatcatgatcgatcag
gagaacgtcgagaaattcgcgcaagagcgtaagatccccttctcgaattttgcatccctc
tgtgcggcatcggaagtcaccgaactaattggtgcagagatcaaagccgtaaacaaagag
tttgcacgggtcgaacagatcaaggattttcgtttgatcgatgtgttgctgactgcagag
gatgaagagctgactgcgacgatgaaactcaagcgtggtcttgtggaaaagaaacacgca
catctcattgaagatatgtacaattag
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