Ruegeria conchae: K3740_09380
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Entry
K3740_09380 CDS
T08595
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00240
Pyrimidine metabolism
rcon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K3740_09380
Enzymes [BR:
rcon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
K3740_09380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
ssDBP
DUF3726
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
UWR04860
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All DBs
Position
1886311..1887225
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AA seq
304 aa
AA seq
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MIEIQYSAEVRAAKDAGQPIVALESTIITHGMPYPQNIEVAAQVEQDIRDAGAVPATIAV
IDGVLNIGLESDQLQGLGQAQGVAKLSRADMAACLASGGTGATTVAATMIAAHYAGIEVF
ATGGIGGVHQGAETSFDISADLHELAQTPVTVVAAGAKAILDLAKTLEVLETLGVPVIAH
GQDEFPAFWSAKSPLAAPLRMDSAEDIAKAHAARRALGLPGGQLVANPIPQIDQIAAEEL
APIIASAQADAETHRITGKSVTPYLLQRIYEQTNGRSLTANIALVRNNARLAAGIAIALV
KTAE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaatccaatattccgccgaggttcgcgccgcaaaagacgcaggccaaccaatt
gttgcgctggaaagcactatcatcacccacgggatgccctacccccagaacatcgaggtt
gccgcacaggtcgaacaggacattcgcgatgcgggcgcagttcccgcaactatcgccgtg
atcgatggcgtgcttaacattgggcttgagtccgatcagcttcagggccttggtcaggcg
caaggcgttgccaagctgtcgcgcgctgacatggccgcttgtcttgcaagtggcggtaca
ggggccaccaccgtcgcagctaccatgatcgcagcgcattatgcaggtatcgaagtattt
gccacaggcggcatcggcggcgttcatcagggggctgaaacctcttttgatatctctgct
gacctgcatgagcttgcgcaaacacctgtgacggttgttgcggccggagccaaagctatt
ctcgacctggccaaaacccttgaggttctggaaacgctcggtgtgccggtcatcgcacac
ggacaggacgaatttccggcgttctggtcagccaagtctccgctggctgctccattgagg
atggacagcgcagaggacatcgccaaagcccatgccgcgcggcgggcgctgggattacct
ggtgggcaactcgtagccaatccgatcccgcagatcgatcagatcgctgccgaggaactt
gccccaatcattgcttccgcacaggccgatgccgaaacacacaggatcaccggcaaaagc
gttacgccttacctgctgcaacgcatctacgaacagaccaatggtcgctcgttgaccgct
aatatcgctctggtacgcaacaatgcacggctggcggcgggcatagcaatagcgctggta
aagacggctgagtga
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