Ruegeria conchae: K3740_10115
Help
Entry
K3740_10115 CDS
T08595
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rcon
Ruegeria conchae
Pathway
rcon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3740_10115 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcon03400
]
K3740_10115 (xth)
Enzymes [BR:
rcon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
K3740_10115 (xth)
DNA repair and recombination proteins [BR:
rcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K3740_10115 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UWR01442
LinkDB
All DBs
Position
2030545..2031324
Genome browser
AA seq
259 aa
AA seq
DB search
MKIATFNINGIKARAEALPRWLDEAQPDVVLLQEIKSIDENFPSEIFEERGYNVETHGQK
SFNGVAIFSKLPLEDVSRGLPGDDDDEQARWIEATVIGKKALRICGLYLPNGNPVPGPKY
DYKLAWMERLYDRARDLLATEEPALMAGDYNIIPQAEDAKRPDAWREDALFRPESRAAFR
KILNLGFTEAFRARTHGPGHYSFWDYQAGAWNRNDGIRIDHFLLTPQAADLMRDCRIDFE
IRGHEKPSDHVPVWVDLDL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacgttcaacatcaacgggataaaagctcgggccgaggcgctaccgcgt
tggctggatgaggcgcagccggatgtcgttttgctgcaggaaatcaaatcgattgatgag
aattttccaagcgagatattcgaagaacgcggatacaacgtggaaacacacgggcaaaag
agtttcaacggcgtcgcaatcttttcgaaactaccgttggaggatgtctcccgaggcctt
cccggtgacgacgacgatgaacaggcccgttggattgaagcgactgtcatcgggaaaaaa
gctcttcgcatctgtgggctgtatctgcctaacggcaatccggtgccggggccgaaatat
gactacaagcttgcgtggatggagcgcctttatgatcgcgcgcgcgatttgctggccacc
gaagagcccgcgctgatggccggggactacaatatcattccgcaagccgaggacgcaaaa
cgccccgacgcctggcgcgaggacgctctttttcggcccgaaagccgcgctgcatttcga
aaaatcttgaacttaggctttaccgaagccttccgcgctcgcacgcatggtccgggtcat
tattcgttctgggactatcaggccggtgcgtggaacagaaacgacgggattcggatcgat
cacttccttctgactccgcaggcagcagatctgatgcgcgattgtcggatcgattttgag
attcgtgggcacgaaaaaccttcggaccatgtaccggtttgggtcgatctcgatctctga
DBGET
integrated database retrieval system
