Ruegeria conchae: K3740_10510
Help
Entry
K3740_10510 CDS
T08595
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rcon
Ruegeria conchae
Pathway
rcon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3740_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcon03019
]
K3740_10510
Enzymes [BR:
rcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3740_10510
Messenger RNA biogenesis [BR:
rcon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3740_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_11
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UWR01513
LinkDB
All DBs
Position
2115850..2117109
Genome browser
AA seq
419 aa
AA seq
DB search
MFDFDMLGLAPALNDALKRANFTQPTPIQNQAIPLALNGHDILGLAQTGTGKTLAFGLPL
IDHLLAQPGKPAPKTAKALILAPTRELVNQIADSLRNLTKKTKLRVATVVGGQSINKQIM
FLSRGTDILVATPGRLIDLMDRGAVDLGSVRHLVLDEADQMLDMGFIHALRRIAPELGTP
RQTMLFSATMPKQMEELSQAYLTNPQRVQVSPPGKAADKITQSIHFVEKPAKPAKLREIL
SADLDALTLVFSRTKHGAEKLMKGLVADGFNAASIHGNKSQGQRDRAIKAFRAGEINVLV
ATDVAARGIDIPGVAYVINYDLPEVPDNYVHRIGRTARAGREGEAIAFCSAEEVDLLRQI
QKLMKIEIPVASGEMPEAIAPKKSPRRPNNRRRGPKPQHSGAPKPGGQKRRRPRRAKAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgacttcgacatgctgggcctcgcgcccgctctgaatgatgcgctcaaacgcgcc
aacttcactcaaccgaccccaatccagaaccaggcgatcccgctggcgctgaacggtcac
gatatcctcggccttgcgcagaccggtacaggtaaaacactggccttcggtctgccgctg
attgaccacctgctggctcagcccggtaaacctgcgccaaaaaccgccaaggcgttgatc
cttgcgcccacacgcgagctggttaatcagatcgccgacagcctgcgcaacctgaccaaa
aagaccaaattgcgcgttgccaccgtggtcggaggtcaatcgatcaacaagcaaatcatg
ttcctatctcgcggcaccgatattcttgtcgccactcccggtcgcctgattgacctgatg
gatcgcggcgcggtcgatctgggttcggtccgtcatctggtgctggacgaggcggatcag
atgctcgacatgggcttcattcacgctctgcgccgcatcgcgccggaactgggcacgccg
cgtcagaccatgctgttctcggccacgatgccgaagcagatggaagagctcagccaggcc
tatctgacaaaccctcaacgggtgcaggtctcgcctcccggtaaagcggcagacaagatc
acgcagtcgatccactttgttgaaaagcctgcaaaacccgccaaactgcgcgagatcctc
tcggcagatttggacgccctaacgctggtcttctctcgcaccaagcacggggccgagaaa
ctgatgaaaggcctcgttgccgatggtttcaacgcggcctcgatccacggcaacaaaagt
cagggccagcgtgatcgcgcgatcaaggccttccgcgcgggcgagattaacgttctcgtc
gcaacagacgtcgctgcgcgcggcatcgacattccgggcgtggcttacgtgatcaactac
gacctgcccgaggtgcccgacaactatgtacaccgcatcggacgtaccgctcgtgcagga
cgcgagggtgaggccatcgccttctgctcggcggaagaggtcgacctgctacgtcagatc
cagaagctgatgaagatcgagatcccggtcgccagcggtgagatgcccgaagccatcgca
cccaagaaatccccacgtcgtccgaacaatcgtcgtcgtggcccgaaacctcagcactcc
ggcgcaccgaagccgggcggtcagaaacgccgccgcccacgtcgcgccaaggctgcctga
DBGET
integrated database retrieval system
