KEGG   Ruegeria conchae: K3740_14110
Entry
K3740_14110       CDS       T08595                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rcon  Ruegeria conchae
Brite
KEGG Orthology (KO) [BR:rcon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcon03400]
    K3740_14110
Enzymes [BR:rcon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K3740_14110
    5.6.2.6  RNA 3'-5' helicase
     K3740_14110
DNA repair and recombination proteins [BR:rcon03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    K3740_14110
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII DEXQc_Suv3 Cas3-like_C_2
Other DBs
NCBI-ProteinID: UWR02185
LinkDB
Position
2836809..2839220
AA seq 803 aa
MTQIPARISDWFAAKGWSIHPHQQDMFDQAQEPATLLIAPTGGGKTMAGFMPSLSELADG
AHDGLHTIYVSPLKALAADIRRNLRAPVEEIGLPIRIEDRTGDTSATQKKRQRVDPPHIL
LTTPESLALLTSYEDAPRMFAGVQRIIVDEIHALAESKRGDQLMLALAQLQALCPDLRRV
GLSATVEDPEGIAQFLARHPDPCRIIQADPGPDPDIAMLETKEMPPWSGGGAAYAIPAVL
EQVRQHKTTLIFHNTRAQAEIFFHNLWLANDESLPIGIHHGSLDRQQRERVEGAMVRGDL
RAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECVAALHAVQEHDLDGDPRGAGPRDVLCQHILIAAAAGPFEADALYTALTSAGPYAGLS
RPEFDACLDFCATGGYALRAYDRWQRLQQRSDGRWQLRDPRAAQRIRMNLGTIQDTDTLK
VRLKRNRGGKPLGEVEEGFAASLTPGDTFLIGGQIVRYEGLREMVVEVSRRADKKPKIAT
FSGTKFATSTQLSDRILRMFAQSDWPHLPAHTADWLALQREVSRLPQRDRLLIESFPDNG
REHICVYGFAGRNAQQTLGLLLTKRMEETGLAPLGFVATDYATLIWGLDAVTDPRPLFQI
DALREGLETWLAGNAVMKRTFRASATIAGLIERNTGGQRKSGRQATFSSDILYDTLLKYD
PDHLLMQITREEAMRGLVDFGRIEAMVARINGRIDLRRLDRVSPLAAPLFLEMGKVPVKG
DAEERLLAEESARLLQAAGIQSP
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgacgcagattcccgcccggattagcgattggtttgccgcaaaaggctggtcgatccac
ccgcatcaacaagacatgttcgaccaggcacaggagccggcgacgctgttgattgccccg
acaggcgggggcaagacgatggccgggttcatgccgtccctgtccgaactggccgacggc
gcgcatgatgggctgcatacgatctatgtctcaccactcaaggcgctggccgctgatatc
cgccgcaatctgcgtgccccggtggaagagatcggcttgcctatacggatcgaagaccgc
actggcgatacgtcggccacgcaaaagaaacgccagcgtgttgatcctccacatatccta
ctgacaacaccagaaagcttggcgttactcacctcctacgaagacgcgccgcgtatgttt
gcgggagtccagcgcatcatcgttgatgagattcacgctttggcggaaagcaagcggggc
gatcaattgatgcttgcactggcacagttgcaagcgctctgccccgatttgcgccgtgtc
ggcctgtctgcgactgtggaagacccagaaggcattgcgcagtttctggcgcggcatcct
gatccatgcagaataattcaggccgatcccggcccagatcccgatatcgcgatgcttgaa
accaaagaaatgcccccctggtctggtggaggcgccgcctatgccattccggcggtgctg
gagcaggttcggcagcataaaaccacactgatcttccacaacacgcgcgctcaggccgaa
atattctttcataatctctggctggcaaatgatgaaagtctgccaatcggtatccatcac
ggcagtctggaccggcagcaacgcgaaagggttgagggcgcaatggtacgcggtgatctg
cgggccattgtctgcacgggcagcctcgatctgggaatcgactggggggatgtggatctg
gtgatccaaattggcgcgccaaagaacgtcaaacggctggtgcagcggatcggacgggca
aaccatcgttataatgccccatcgaaggcgctgttggtacctgccaaccggtttgaagtg
gtcgaatgtgtggccgcactgcatgcggtgcaagaacatgacctggacggtgatcctcgc
ggcgcgggccctcgggatgtgctctgtcagcatatcctgatcgccgctgcagccggaccg
ttcgaggccgatgcgctctacaccgcgctgacctcggcggggccctatgccggcctcagc
agacccgaatttgatgcctgtctggatttctgcgccaccggcgggtacgccctgcgcgcc
tatgaccgctggcagcggttgcagcagcgatcagatgggcgctggcaattgcgtgatcca
cgagcagcgcagcgtatccggatgaatctgggcacaattcaggacactgacacgctgaag
gtacggttgaaacgaaatcgcggtggcaagccacttggcgaggtggaagaagggtttgct
gcctcgctcacccccggtgacacatttctgatcggcggccagatcgtccgttacgaaggg
ctgcgtgaaatggtggttgaggtcagccgccgtgccgataagaaacccaagatcgcaacc
ttctctggcacaaaattcgccacatctacgcagcttagcgaccgcattctgcgtatgttc
gcgcaatctgactggccacacttgcccgcccacactgccgattggctggcgttgcaacgc
gaggtctcgcgcctaccgcagcgcgatcgactattgatcgaaagcttccccgacaatggg
cgtgaacatatctgtgtctatggctttgcaggccgaaatgcgcagcagaccctgggcttg
ttactaaccaaacgtatggaagagaccggccttgccccactgggctttgtcgctaccgac
tatgccaccttgatctggggcctggatgcggtaaccgatccacgcccattgtttcagatt
gatgcgctgcgcgaagggctggaaacgtggttggcaggcaatgccgtgatgaagcgcacg
ttccgcgcctcggccacaatcgcaggtctgatcgaacgcaataccggagggcagcgcaaa
agcggacggcaagcgacgttttcgtcagacatcttgtatgacactctgctgaaatacgac
cccgaccatcttttgatgcagatcacccgcgaagaagcaatgcgcggattggttgatttc
gggcggatcgaagcgatggtcgcgcggatcaatggccgcatcgatcttcggcggctggat
cgcgtttctccattggctgcgccgctctttctggaaatgggaaaagtgccagtcaaaggt
gatgcagaagaacgccttctggccgaagagagtgcccgcttgctgcaagctgcaggcata
caatctccgtga

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