Ruegeria conchae: K3740_16320
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Entry
K3740_16320 CDS
T08595
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00260
Glycine, serine and threonine metabolism
rcon00630
Glyoxylate and dicarboxylate metabolism
rcon00670
One carbon pool by folate
rcon00785
Lipoic acid metabolism
rcon01100
Metabolic pathways
rcon01110
Biosynthesis of secondary metabolites
rcon01200
Carbon metabolism
Module
rcon_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K3740_16320 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K3740_16320 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
K3740_16320 (gcvP)
00670 One carbon pool by folate
K3740_16320 (gcvP)
Enzymes [BR:
rcon01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
K3740_16320 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF489
Motif
Other DBs
NCBI-ProteinID:
UWR02590
LinkDB
All DBs
Position
complement(3287356..3290211)
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AA seq
951 aa
AA seq
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MAFKLTDYEAYDFANRRHIGPSPTEMRDMLKVIGFKTLDQLIDATVPPAIRQKEPLDWGP
AMTERDALFHMKEVASKNKVLTSLIGQGYYGTTTPAPILRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMVSDLTGLDVANASLLDEATAAAEAMAMAKRGGRSKANNAAFFVDKNC
HPQTIAVIKTRAEPLGIEVQVADPDTLDAGAVFGAIFQYPGTHGHVRDFTAEIAALHEHK
AIAIVAADILSLALLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMATTDKLKRSMPGR
IIGVSIDSRGNKAYRLALQTREQHIRREKANSNVCTAQALLAVIASMYAVYHGPDGIKAI
AQSVHRKTSRMAAGLEEAGFAVEPEVFFDTITVEVGHLQNVVMEAAVARGVNLRKVGDTK
VGISLDEQTRPETIEAVWGAFGIDRKDDSSNKQYRLPDYALRESEYLTHPIFHKNRAEAE
ITRYMRRLADRDLALDRAMIPLGSCTMKLNATIEMIPVTWPEFGNLHPFVPQDQAQGYHE
MIDDLNDKLCQITGYDAISQQPNSGAQGEYAGLLTIRNYHFARGEGQRNVCLIPTSAHGT
NPASAQMVGWQVVPVQADDKGNIDLNDFRAKAEKHSDHLAACMITYPSTHGVFETTVQEV
CQITHDHGGQVYIDGANMNAMVGLARPGDVGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
AHLTEHLPGHPEYGTAVGPVSAAPFGSPSILPVSWAYVLLMGGAGLTQATKVAILNANYI
AARLKDAYPILYTSDTGRVAHECILDTRPLDEAAHVSVDDIAKRLVDSGFHAPTMSWPVA
GTLMVEPTESEPMDELDRFCEAMLSIRAEAQDIIDGKIDAENNPLKNAPHTVRDLVGSWD
RPYTREQACFPPGSMGVDKYWSPVNRVDNAYGDRNLICTCPPMSEYEEAAE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaaactgaccgattacgaagcctatgacttcgccaaccgccgccatatcggg
cccagcccgaccgagatgcgcgacatgctcaaggtgatcggcttcaagacactggaccag
ctgatcgacgccaccgtcccgcctgcgatccggcagaaagagccgctggactggggcccg
gcgatgacagaacgcgacgctctgttccacatgaaagaggtggcgagcaagaacaaggtt
ctgacctcgctgattggtcagggatattatggcaccaccacgccggcgccgatcctgcgc
aacatcctggaaaacccggcctggtacacggcctatacgccctatcagcccgagatcagc
cagggccgccttgaggcgctgttgaacttccagaccatggtcagcgacctgaccgggctg
gatgtggccaacgcctcgctgctggacgaagccacagctgcggcggaagcgatggccatg
gccaagcgcggtggtcggtccaaggccaacaatgcagccttctttgtcgacaagaactgc
cacccgcagaccatcgcggtcattaaaacccgggccgagcctctgggcatcgaagtgcag
gtggccgatccggacacgctggatgcaggcgcggtctttggcgcgatcttccagtatccc
ggcacccacggccatgtgcgtgacttcaccgccgagatcgcggcgctgcatgagcacaag
gccatcgcaattgtcgccgccgatatcctgtcgctggcgctgctcaagtcaccgggtgag
atgggcgccgacattgccatcggctcgacccagcgctttggcgttccgatgggctatggt
ggcccgcacgccgcctatatggcgaccaccgacaagctgaagcgctcgatgccgggccgg
atcatcggtgtcagcatcgacagccgcggcaacaaggcctatcgcctggcgctgcagacc
cgcgagcagcatatccgccgcgagaaagccaactcgaacgtttgcactgcgcaggcgctg
ctggcggtgattgcttcgatgtatgcggtgtatcacggccccgacggcatcaaggccatc
gcgcaatcggtgcaccgcaagacctcgcgcatggctgccggtctggaagaggcaggcttt
gccgtcgaacccgaggtattcttcgacacgatcacggttgaggttggccatctgcagaac
gtcgtgatggaggccgccgtggcccgcggtgtgaacctgcgtaaagtgggcgacacgaaa
gtgggcattagcctggacgaacagacccggcccgagaccatcgaggcggtctggggggcc
tttggcatcgaccgcaaggatgacagctcgaacaagcagtaccgcctgccggattacgcg
ctgcgcgaaagcgaatacctgacccatccgatcttccacaagaaccgggccgaggccgag
atcacccgctatatgcgccgtctggccgaccgcgacctggcgctggaccgggcgatgatc
ccgctgggctcgtgcaccatgaagctgaacgccacgatcgagatgatcccggtcacctgg
cccgagttcggcaacctgcacccgtttgtgccgcaagatcaggcgcagggctatcacgag
atgatcgacgatctgaacgacaagctgtgccagatcaccggctatgacgcgatctcgcag
cagcccaactcgggcgcgcagggtgagtacgcgggccttctgaccatccgcaattatcac
ttcgctcgtggcgaggggcagcgcaatgtctgcctgatcccaacctcggcgcatggcacc
aacccggcctcggcccagatggtcggctggcaggttgtgccggtgcaggcggatgacaag
ggcaacattgacctgaacgacttccgcgccaaggcggaaaagcactcggatcatctggcc
gcctgcatgatcacctatccatccacccatggcgtgttcgagaccaccgtgcaggaggtc
tgccagatcacccatgatcacggcggtcaggtctatatcgacggcgccaacatgaacgcc
atggttggcctggcgcgtccgggcgatgtgggcggtgacgtcagccacctgaacctgcac
aagaccttctgcatcccgcatggcggcggcggccccggcatgggcccgatcggcgtcaag
gcgcacctgaccgagcacctgcccggccacccggaatacggcaccgccgtgggcccggtc
tcagccgcaccctttggctcgccctcgatcctgccggtctcatgggcctatgtgttgctg
atgggcggcgcaggtctgacccaggccacgaaagtggcaatcctgaacgccaactacata
gcggcgcggctcaaggatgcctacccgatcctctacacgtcggacacgggccgggtggcg
catgaatgcatcctcgacacccgtccgctggacgaggccgcgcatgtcagcgtcgatgac
attgccaagcgcctggtcgattcaggcttccacgccccaaccatgtcctggccggtggcc
ggaaccctgatggtggagcccacggaatcggagcccatggacgagctcgaccgcttctgc
gaggccatgctgtccattcgggccgaggcgcaggatatcatcgacggcaagatcgatgcg
gaaaacaacccgctgaaaaacgccccccacacggtgcgcgatctggtcggcagctgggac
cgcccctacacacgcgaacaggcctgcttccctccgggctccatgggcgtcgacaaatac
tggtcccccgtcaaccgcgtcgacaacgcatacggtgacagaaacctcatctgcacatgc
ccgccaatgtcagaatacgaagaagccgcagagtaa
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