KEGG   Ruegeria conchae: K3740_16525
Entry
K3740_16525       CDS       T08595                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
rcon  Ruegeria conchae
Brite
KEGG Orthology (KO) [BR:rcon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcon03016]
    K3740_16525 (truB)
Enzymes [BR:rcon01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     K3740_16525 (truB)
Transfer RNA biogenesis [BR:rcon03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    K3740_16525 (truB)
 Prokaryotic type
    K3740_16525 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: UWR02630
LinkDB
Position
3327860..3328765
AA seq 301 aa
MGRKRKGRDISGWLVVDKPAGMTSTAVVNKVRWAMDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYITDALKAYTFTVRLGQATNTDDAEGEVISESSARPTDEDIKQALSPFLGDIMQ
VPPKFSAVKIDGQRAYKLARDGEDVELSARPLWVEELILVDRPDTDHVVLEMTCGKGGYV
RSIARDLGEALGCYGHVKELRRIWSGPFEAEDGLSIEQIDEMAKSTALDEYLHPLETGLS
DLPELKCTPEGATRLRNGNPGMVLASDVEYGDEAWASLDGKAVAVGIYKSGELHPSRVFV
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggacgcaaacgcaagggtcgtgacatttccggttggctggtggtggacaagcctgcg
ggtatgacttcgaccgcggtcgtcaacaaggtacgttgggcgatggacgccaagaaagca
ggccatgcgggcacgctggaccccgaagcaactggcgttctggcggtagctttgggcgag
gcgaccaagactgttccctacatcaccgatgcgctgaaagcctacacattcactgtgcga
ttaggacaggcgaccaataccgacgatgcggaaggcgaagttatctcggaaagctctgcg
cgcccgacggatgaagacatcaaacaggcgctctcaccgttcctcggggacatcatgcag
gtgccgcccaagttttccgctgtgaagatcgacggtcagcgcgcgtacaaactggcccgc
gatggcgaagatgtggaactgtccgcacgccccctgtgggttgaagaattgatccttgtc
gaccgacccgacaccgatcatgtggtgttggaaatgacatgcggcaaaggcgggtatgtc
cgttcgatcgcgcgcgatctgggcgaagcgctgggctgctacggccacgtcaaagaactc
cgtcgcatctggtcgggtccgttcgaggccgaagacggcctgtccatcgaacagatcgac
gagatggccaaatccacagcattggatgaatacctgcacccgttggaaaccggcctgtct
gatctgcctgagttgaagtgcaccccggaaggggcaacccgactgcgcaatggcaatccg
ggaatggtgctggcatccgacgtcgaatacggcgacgaggcctgggcttcgctggatggc
aaggctgtggccgtcgggatatacaaatccggtgaattgcatcccagccgggtgttcgtc
gtttga

DBGET integrated database retrieval system