Ruegeria conchae: K3740_17010
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Entry
K3740_17010 CDS
T08595
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rcon
Ruegeria conchae
Pathway
rcon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3740_17010 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcon03019
]
K3740_17010 (recQ)
03400 DNA repair and recombination proteins [BR:
rcon03400
]
K3740_17010 (recQ)
Enzymes [BR:
rcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3740_17010 (recQ)
Messenger RNA biogenesis [BR:
rcon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3740_17010 (recQ)
DNA repair and recombination proteins [BR:
rcon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K3740_17010 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UWR02723
LinkDB
All DBs
Position
3416868..3418907
Genome browser
AA seq
679 aa
AA seq
DB search
MFDSAPLLRDVFGFDDFRPGQEEIVDAVTAGENVLAIMPTGGGKSLCFQLPALLRDGVTV
VISPLIALMRDQVRGLQEAGVEAGALTSGNTPEETDAVWDALEGGRLKLLYMAPERLAAG
SALGMLRRINVNLIAVDEAHCVSQWGHDFRPDYLRIGELRRTLNVPLAAFTATADAETQE
EIVEKLFDGVEPRKFLRGFDRPNIHLAFAAKDGPRKQVLDFAAARKSQSGIVYCGTRNKT
EVLAQALRAEGHSACHYHGGMEAEDRRIVETRFAREDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGGPAETLTLFGPDDIRLRRSQIDEGLAPPERRMADHARL
NALLGLAEALKCRRQTLLGYFGEQIEPCGKCDLCDSPPEVFDGTTPVRMALSAILRTEEW
FGAGHLIDILLANETDKIRARRHDNLSTYGIGKDWSRPQWQAIFRQMMGHDLVRPDPERH
GALRITQTAKPILKGEAQIDLRKDTIRKATRRPAVKAMVSEEDAPLLSALKAKRRALAEA
ARVPAYVIFPDRTLIEMAESRPANLDDMARISGIGAKKLERYGATFLEVLIGAVEELHPA
RRKLAGRDQGDIYDQLLEVQSQLSRGPDGIDKPLSCSASQLAKVAQLRPDDPRAMEQVLG
DRRHERFGAAFLDVLQQAG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactccgcacccttgttgcgagacgtctttggattcgacgacttccgccccggg
caggaagagattgtcgatgccgtgaccgcgggcgaaaacgtgctggccatcatgcccacg
ggtggtggtaaatccctttgttttcaattgcctgcactgttgcgcgacggggtaactgtg
gtgatatctccgctcatcgccctgatgcgcgatcaggtacgtgggctgcaagaggccggt
gtcgaggcaggcgcgctcacctcgggcaatacacctgaggaaactgatgccgtttgggat
gctttagagggtggtcggctcaagctgctttatatggcgccggaacggctggctgcaggg
tctgcactgggaatgctacgtcggatcaacgtcaatctgattgccgtggacgaggcgcat
tgtgttagccaatggggccatgattttcgccctgattacctgcggatcggagagctgcgt
cgcacgctaaatgtaccgttggccgcttttacagcaacagcggatgcggaaacgcaggaa
gagatcgtcgaaaagctgttcgacggtgttgagccgcgtaaattcctgcgcgggtttgac
agacccaatatccatctggcctttgcggccaaggatggaccgcgcaaacaagtcctcgat
ttcgctgccgcccgaaagtcccaatccggcatcgtctattgcggcacccgcaacaagacc
gaagtgcttgcgcaagccctgcgcgccgaagggcattcggcctgccactatcacggcggg
atggaggccgaagatcgccgcatcgtcgagacccgctttgcgcgcgaggatgggctgatc
gtcgtcgccactgtcgcgtttggcatgggcatcgataagcccgacatccgctgggttgct
catgcggacctgcctaaatcgatcgaagcttactatcaggaaatcggtcgtgccgggcgc
gatggtggtcctgccgaaacccttacgttgtttggccctgacgatatccgactgcgacgc
tctcagatcgacgaagggctggccccacctgaacggcggatggcggatcatgcacgcctg
aatgcgttgcttggattggccgaagccctaaaatgccgccgccagaccctgctgggatat
ttcggagaacagatcgaaccttgcggcaaatgcgatctttgcgacagtcctcctgaagtg
ttcgatggcaccacgccggttcgcatggccctgtccgctattctgcgcacagaagaatgg
ttcggcgcgggtcatctgatcgacatcctgctggccaatgagaccgacaaaatccgcgcg
cggcgacacgacaacctgtcaacctacggcatcggcaaggactggtcgcgcccgcaatgg
caggcgattttccggcagatgatgggccatgatctggtccgccctgaccccgagcgccac
ggtgccttgcgcataacacaaaccgccaaaccgatcctgaagggtgaggcgcagattgac
ctacgtaaagacacgatccgcaaagccacccgtcgtcccgcagtcaaggcgatggtgtcc
gaggaagacgcaccgctgctctcggcgctcaaggccaagcggcgcgcactggccgaggct
gcgcgggttccggcctatgtcatctttccagatcgcaccctgatcgaaatggcggagtcc
cgacccgcaaatctggacgatatggcccggattagcggcattggggcaaaaaagttggag
cgctatggtgcgaccttccttgaggtgctgatcggcgcggtagaagagctgcacccggca
cggcgcaagcttgccggccgcgatcagggcgacatctacgatcagttgcttgaggttcaa
tcacaattgtcgcgaggccccgacgggatcgacaaaccactgagctgttcggcatcgcaa
ctggccaaggtggcgcaattgcgcccggatgatccaagagcgatggagcaagttctgggc
gaccgtcgtcacgaaaggtttggcgcggcgtttctggacgtgctgcagcaagcgggctag
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