Ruegeria conchae: K3740_18475
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Entry
K3740_18475 CDS
T08595
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcon
Ruegeria conchae
Pathway
rcon00061
Fatty acid biosynthesis
rcon00071
Fatty acid degradation
rcon01100
Metabolic pathways
rcon01212
Fatty acid metabolism
rcon02024
Quorum sensing
rcon04146
Peroxisome
Module
rcon_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcon00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K3740_18475
00071 Fatty acid degradation
K3740_18475
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K3740_18475
09145 Cellular community - prokaryotes
02024 Quorum sensing
K3740_18475
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcon01004
]
K3740_18475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcon04147
]
K3740_18475
Enzymes [BR:
rcon01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K3740_18475
Lipid biosynthesis proteins [BR:
rcon01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K3740_18475
Exosome [BR:
rcon04147
]
Exosomal proteins
Exosomal proteins of breast milk
K3740_18475
Exosomal proteins of breast cancer cells
K3740_18475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UWR05088
LinkDB
All DBs
Position
3726577..3728520
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AA seq
647 aa
AA seq
DB search
MQSLPALLHRNVTQFGDAPAYREKEFGIWQCWSWAETAKEIRAIALGFLEIGVENGDHIA
VIGRNRPAHYWSMVAAQMVGAIPVPLYQDAVAEEMTYVMEHCGAKYVVCGDQEQVDKVIE
IQEKVHQIKHILYTDKRGMRKYDHSQMNALEDIMAEGSAGHARFDAELDKRIAEITYDDT
CVMLYTSGTTGKPKGVVLSNRNVIESAKNSADFDHLTRNEDILSYLPMAWVGDFIFSIGQ
AYWCGFCVNCPESADTMMTDLREIGPTYFFAPPRVFETQLTNVMIRMEDAGKLKQRMFHH
FMAHAKKVGGLLLDGKPVGFGDKLKYALGNLLVYGPLKDTLGYGRFRVGYTAGEAIGPEI
FDFYRSLGINLKQLYGQTEATVFITVQPDGEVRADTVGVPAPDVELKIDDSGEIHYRSPG
VFVEYYNNPDSTASTKDAEGWVATGDAGFIEESSGHLRIIDRAKDVGKMADGSMFAPKYV
ENKLKFYPDILEVVLFGNGKDRCVAFINIDLTAVGNWAERNNVAYASYQELAGHPRVLET
IRGHVEAVNKSVAADEMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRGFVEEKFHDIIA
ALYDGSGQVSTTTEVTYEDGRKGSISATLEIVDAPVVPVAQHKVAAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccttccggcgctgttacaccgcaatgtgacccagttcggggatgccccggct
taccgcgaaaaggaattcgggatctggcaatgctggtcctgggccgaaaccgccaaagaa
atccgcgccattgcattgggttttctggagattggcgttgaaaatggcgatcatattgct
gtcataggccgtaatcgcccggcgcattattggtcgatggtcgcggcacagatggtgggc
gcgatcccagtgccgctttaccaagacgctgttgccgaagagatgacctatgtgatggag
cattgcggcgcaaaatatgtcgtctgcggtgatcaggagcaagtcgacaaggtcatcgaa
attcaggaaaaagtgcatcagatcaagcacattctgtatactgataaacgcgggatgcgg
aaatacgaccacagccagatgaacgcgcttgaagacatcatggccgagggcagtgccggc
cacgcgcggtttgatgcggaactcgacaagcgcatcgccgagatcacctatgacgacacc
tgcgtgatgctctacaccagcggaacgacgggcaagcccaagggagtggtgctgtcgaac
cggaatgtgatcgaaagcgccaagaactcggcggacttcgatcatctgacccggaatgag
gacatcctgtcttatctgccgatggcctgggtgggcgatttcatcttctccatcggtcag
gcctattggtgcggcttctgtgtgaactgccccgaaagcgccgacacgatgatgaccgac
cttcgcgagatcgggccgacctatttctttgcaccgccgcgcgtattcgaaactcagctg
accaatgtgatgatccggatggaggatgcaggcaagctgaagcagcgcatgttccatcat
ttcatggcccatgccaaaaaggttggcgggttgctgttggacggcaagcctgtgggcttt
ggcgacaaattgaaatacgcgctgggcaacctgctggtttatggcccgctcaaggatacg
ttgggttatggccgctttcgggtgggctatacagcgggtgaggcaattgggccggaaatc
tttgatttctatcgctctttgggcatcaacttgaaacaactctatggccagaccgaagca
actgtgttcatcaccgtgcagccggatggtgaggtgcgtgccgatacggttggtgtgccc
gcgccggatgtcgagctgaagatcgatgacagcggcgaaatccactatcgctcgcccggt
gtgtttgttgagtattacaacaatccggactccacggcttcaaccaaagatgccgagggc
tgggttgcgaccggtgatgccgggttcatcgaagaaagctcgggccatttgcggatcatc
gatcgcgccaaggatgttggcaaaatggccgacggatcgatgttcgcgccgaaatatgtt
gagaacaagctgaagttctatcctgatattctcgaagtcgtgctgtttggcaatggcaag
gatcgttgtgtcgccttcatcaatatcgatctgaccgcggttggaaactgggccgaacgc
aacaacgtggcatatgcgtcctatcaggagctagcgggtcatccccgagtgttagagacg
attcgcggccatgtggaagcggtgaataagtcagttgcggctgatgaaatgctgtcgggc
tgtcaggtgcatcgctttgtggttctgcacaaggaactggatgccgacgatggagaaatg
acccggactcggaaggtgcgccgtggctttgtcgaggagaaattccacgacatcatcgct
gcgctttatgacgggtctggccaagtgtcgaccaccaccgaggtgacctatgaagatggt
cgcaagggttcgatttctgcgacgttggagattgtcgatgcgccggttgtgccggtcgcg
caacacaaggtggcggcggaatga
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