KEGG   Ruegeria conchae: K3740_19805
Entry
K3740_19805       CDS       T08595                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
rcon  Ruegeria conchae
Pathway
rcon03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rcon00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    K3740_19805 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rcon02044]
    K3740_19805 (tssM)
Secretion system [BR:rcon02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K3740_19805 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical YwiC DUF2207_C
Other DBs
NCBI-ProteinID: UWR05517
LinkDB
Position
unnamed1:complement(127068..130640)
AA seq 1190 aa
MIVLRFLKFVFLSIYTVLFFTATALSLSLYFFGPLIGSDEWRPLDGVAARLIWCGVIFAI
FLVIALTVFFVRRRREKNLTEEITEAVSDGGDMIDSEISELRGKLKTAMAALRKSKNGRR
HLNELPWYVMIGPPGAGKTTAIVNSGLNFPLADEMGKTAIGGVGGTRNCDWWFTENAVLI
DTAGRYTTQESDAEVDNAAWIGFLGLLKKYRKRQPINGAMIAISLSDLSLQDEITQKEHA
KAVRRRLEELREKLGVRFPVYILFTKADLIAGFAEFYDNLGKEDREQVWGFTLPLDKSRS
EQSPVAAFDEEFALLLGRLNAQSLERMQTETDPQRRALVAGFPMQVASFRKVAHEFLTEV
FQDSRYQHRHMLRGVYFTSGTQEGTPIDRLMLGMARTFGIGRQAIGTGQGSGRSYFLTRL
FDQVIFREAGLVSADDKVERRYRITKWVSVAATVMAAVTVGALLVRSFSGNSELIAEAQE
GVSAYQAAAATLPPSPVGDTDLVPVVQALNTLRDLPANPTLSDPDPETRLTYGLYQGDVI
GTQAAQTYRAALNQRFLPRLLLRLEEQMSANINNPDVLYEALKVYLMLGLQGPMNPNLVN
EWMNIDWTVSFPGPSREEFRADLNDHLEALLSQPMQAVALNGPMVEQIQGILSELPLAQR
VYNGIISSPTATALPEWRITEVGGPAVGRVLVRSSGKPLNDGIEGIFTYKGFNDVFLGEA
VGVAKRVQKESWVLGPRGEAEQTELALAALSRDVLDLYYNDYIARYDAMLGDIDIVPMES
LSHAVEVTNVLSGPTSPIVNILNSISDETKLTESRSALPNTDALNEGLSNAASLEVQSAT
SVQTQILLEALAKSSGATSSEPVQEPGQYVEDRFSWLHQLVEQQQGQPSQLDLLMGSLTG
VYQELNKMSFSGVTGAESGQALQQFQQEAARIPGPMERWALQIIDGSSGITSDSTRASIN
ARWQANVLPFCEQVVTDRYPFNRRSGADVAMGDFSKLFGPQGLIDTFFNENLAKHVDMRT
RPWSWKTSVNEADLGISQAVLTQFQNAAEIREAFFAAGPQPRIQFQIMPEALDPKAKGVK
LEIDGQTLEFRHRGGLPSPMAIAWPGQVGLARVSFEPEKRNIESVLSKDGPWAWFRLLDA
AEVRRTNVSDRKKVIFNVGGRIAIFQLQSGSVINPFALPALQKFSCPKSF
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgatcgtcctcagatttctgaagtttgttttcctatccatctacacggttctgttcttt
accgcgactgctctgtcgctgagcttgtatttcttcgggcctttgatcggatcggatgaa
tggcgcccgttggatggtgtggcggcgcgcctgatctggtgtggcgtcatatttgccatc
tttttggttatcgcgctgacggtattctttgtccgccgcagacgcgaaaagaacctaacc
gaagaaatcaccgaagccgtcagtgatggcggcgatatgatcgacagcgagatttccgag
ctgcgtggcaagttgaaaacggcaatggcggcgctgcgtaaatccaagaacggacgacgc
catctaaacgaattgccatggtatgtgatgattggcccgccaggcgcaggcaagaccacg
gcgatcgtgaattctggccttaactttccactggccgatgaaatgggaaaaacagcgatt
ggtggcgtcggcggaacgcgcaattgcgattggtggttcactgaaaatgctgttcttatc
gacactgcggggcggtacacaacgcaagaaagtgacgctgaagtcgacaatgcggcctgg
atcggttttcttgggttgctcaagaaatatcgtaaacgccagcccattaatggcgcgatg
attgcgatttcgctttctgatctgtctctgcaggatgaaatcactcagaaagagcacgcg
aaagccgttcgccgtcggcttgaggagctgcgcgagaagttgggtgtgcgctttccggtc
tatatactgtttaccaaagctgatctgattgccggtttcgccgaattctacgacaatctg
ggcaaggaagatcgtgaacaggtgtggggcttcacactgccattggacaagtctcgatcc
gagcaatctcctgttgctgccttcgatgaagagttcgccttgctgctgggccgcctgaac
gcccaatcgctggaacggatgcagaccgaaaccgacccacagcgccgcgctctggttgcc
ggtttcccgatgcaggtggcatccttccggaaggttgcgcatgaatttctaaccgaggtt
tttcaggacagccgctatcagcatcgccacatgctgcgcggagtgtatttcacgtctgga
acgcaggaaggcacaccgattgaccggctgatgctggggatggcccggaccttcgggatc
gggcgtcaggccattggtacggggcagggttcagggcgctcgtacttcctgaccagattg
tttgatcaggtgattttccgtgaagcaggtctggtcagtgcagatgataaggttgaacgc
cggtacaggattaccaaatgggtttcggtcgccgcgactgttatggcggccgtgacggtt
ggcgctttgcttgtgcgcagcttctcgggaaattccgagctgattgccgaggcgcaggaa
ggtgtgtccgcctatcaggctgctgcagcaacgcttccgcccagcccggtgggagatacc
gatcttgtacctgtcgtgcaggctttgaatacgttgcgcgatctgcctgcgaatccgaca
ctgtcagatccggatccggaaacgcgcctgacatatggtctgtatcagggtgacgtaatt
ggtacgcaggcggcgcagacctatcgcgccgcattgaaccaacggttcctaccgcgcttg
ctgctgcgtctggaggagcagatgagcgcgaatatcaacaatcccgatgttctatatgaa
gcgctcaaggtttacctgatgttgggcttgcagggtccgatgaacccgaacctcgtcaat
gaatggatgaatatcgattggacggtttcgttccctggcccctctcgtgaggaatttcgc
gccgacctgaatgatcaccttgaagctttgctgagtcagccgatgcaggccgttgccttg
aatgggccgatggtggaacagatccaaggtattttatcggagctgcccttggcgcagcgg
gtgtataatgggatcatatccagcccaactgcaacggccttgccggagtggcgcattacc
gaagttggcggccctgccgttggtcgcgttctggtccggtcgtctgggaagccgttaaat
gacgggatcgaggggatcttcacctacaaaggcttcaacgacgtatttttgggcgaagcg
gtcggagtggccaaacgggtacaaaaggaaagctgggttctaggtcctcgcggagaggcc
gagcaaaccgaactggcccttgcggcgcttagtcgagatgttctggacctgtactacaac
gactacatcgcgcgctatgacgccatgctaggcgatatcgacatcgttcctatggaaagc
ctgagccatgcagttgaggtgaccaacgtactgtcaggcccgacgtcgcctatcgtgaac
atcctaaattcgatttctgacgagacgaaactgacagaaagccgttcagccctgcccaat
acggatgcgttgaacgaagggttgtcaaatgccgccagcctggaagtgcagtccgcaacc
tccgtccagacacaaatcctgctggaagcgctggccaagtccagcggtgcaacttcatca
gagccggtgcaagaaccgggccaatatgtcgaagataggttctcttggttgcatcagttg
gtggaacagcaacagggacaaccctcgcagcttgatcttctgatgggatcgctgaccggt
gtgtatcaagaactgaacaagatgtccttcagtggtgtcactggcgcggaatccggtcaa
gcgctgcagcagttccagcaggaagcggcgcgtattcctggcccgatggaacgctgggca
ttgcagatcatcgatgggtcatctggaatcacgtcggacagcacgcgcgcatctattaat
gcgcgctggcaggctaatgtactgcccttctgtgaacaggttgtgaccgatcgttatccg
ttcaaccgcagatcgggcgcggatgttgccatgggtgatttcagcaagctgtttggcccg
caaggtttgattgatacgttcttcaacgaaaacctcgcgaagcatgtggatatgcgtacc
cggccgtggtcttggaaaaccagtgtaaatgaggccgatctggggatcagtcaggcagta
ctgacccagtttcagaatgcagcagagatccgagaagcgttttttgcagctggcccccag
ccgcggatacagtttcagatcatgcccgaggcgctggaccccaaggccaagggcgtgaag
ctggagattgacggtcagacgctggagttccgtcatcgtggcgggcttccgtcaccgatg
gccattgcctggccgggtcaggttgggctggcgcgcgttagctttgaaccggaaaagcgc
aacattgaaagcgtcttgtccaaggacggaccgtgggcctggttccggttacttgacgca
gccgaggtgcggcgcacaaacgtgtcagaccgcaagaaggtaatattcaacgttggcggt
cgcatcgcgattttccagctgcaatcaggatcggtcatcaacccctttgccttgccggcg
ctgcagaaattcagctgccccaagtctttctga

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