Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase, B subunit
|
KO |
|
Organism |
rcp Rhodobacter capsulatus
|
Brite |
KEGG Orthology (KO) [BR:rcp00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:rcp03032]
RCAP_rcc00004 (gyrB)
03400 DNA repair and recombination proteins [BR:rcp03400]
RCAP_rcc00004 (gyrB)
Enzymes [BR:rcp01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RCAP_rcc00004 (gyrB)
DNA replication proteins [BR:rcp03032]
Prokaryotic type
DNA Topoisomerases
RCAP_rcc00004 (gyrB)
DNA repair and recombination proteins [BR:rcp03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RCAP_rcc00004 (gyrB)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
4133..6583
|
AA seq |
816 aa
MTETPKNKAEYGAESIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HANYVAVKIHADSSVSVRDNGRGIPVDIHPEEGVSAAEVIMTQLHAGGKFNNTDEGGNAY
KVSGGLHGVGVSVVNALSDWLELKVWRNDKVYFARFEKGDCVVHVHEIGEAPGEKGTEVR
FMASAKTTDPEGTFSNLDYVFKTLETRLRELAFLNSGVRIILEDERPAEPLRSELHYEGG
VREFVKYLDRSKTAVMPDPIYMVGEVRGIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTH
LAGFRGALTRTITKYAQDSGIAKREKIDFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLV
SSEVRPAVENLVNEKLAEWFEEHPTEAKGIVGKIIEAALAREAARKARELTRRKTAMDVA
SLPGKLADCQEKDPALSEVFLVEGDSAGGSAKQGRERKNQAVLPLRGKILNVERARFDRM
LSSDQIGTLITALGTGIGRDEFNIAKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPEL
IEHGYLYIAQPPLYKVARGKSEVYLKDQAALEDYLVHQGVEGAILRLGDGTDIIGADLTR
LVEEARQVRRILQAFPTHYPQRILEQAAIAGALLPGRIDADAQGVADELSARLDLIALEY
ERGWMGRPTQDHGLRMSRILRGVEEVRTLDGPVLRSGEARRLSQFTTSLQESYRAPARLI
RKDREQFIHGPLDLLTAILQEGEKGLTLQRYKGLGEMNPEQLWETTLDPAARTLLQVRVD
DVAEAEDIFSKLMGDVVEPRREFIQQNALSVENLDF |
NT seq |
2451 nt +upstreamnt +downstreamnt
atgaccgaaaccccgaagaacaaagccgaatatggcgcggagtcgatcaaggtcctgaag
ggcctcgaagcggtgcgcaaacgccccggcatgtatatcggcgacaccgacgacggctcg
ggcctgcatcacatggtctatgaggtcgtcgacaacggcatcgacgaggccctggcgggc
catgcgaattacgttgcggtgaagatccacgccgacagctcggtttcggtgcgcgacaac
ggccgcggcatcccggtcgacatccaccccgaagagggtgtctcggcggccgaggtcatc
atgacccagctgcatgcgggcggcaaattcaacaacaccgacgagggcggcaacgcctac
aaggtctcgggcgggttgcacggcgtcggcgtttcggtggtgaacgcgctctcggactgg
ctggagctgaaggtctggcgcaatgacaaggtctatttcgcccggttcgaaaagggcgat
tgcgtggttcatgtccacgagatcggcgaggccccgggcgaaaagggcaccgaggtccgg
ttcatggcgtcggccaagaccaccgaccccgaggggacgttctcgaacctcgattacgtc
ttcaagacgctggaaacccggctgcgggaactggccttcctgaattccggcgtgcggatc
attctggaagatgaacgccccgcggaaccgctgcgcagcgagctgcattacgagggcggc
gttcgggaattcgtcaaatacctcgaccggtcgaaaaccgcggtgatgcccgatccgatc
tacatggtcggcgaggtccgcggcatcggtgtcgaagtggcgatgtggtggaatgacagc
tatcacgagaccgtgctgcccttcaccaacaacatcccgcagcgcgatggcggcacccat
ctggcgggctttcgcggcgcgctgacccggacgatcaccaaatatgcgcaagacagcggc
atcgcgaagcgggaaaagatcgatttcaccggcgatgacgcccgcgaaggcctgacctgc
gttctgtcggtcaaggtgcccgatccgaaattctccagccagaccaaggacaagctggtc
tcctccgaggtccgtccggcggtcgagaatctggtgaacgagaagcttgcggaatggttc
gaggagcacccgaccgaagccaagggcatcgtcggcaagatcatcgaagccgcgctggcc
cgcgaagccgcccgcaaggcccgcgaactgacccggcgcaagaccgcgatggatgtggcc
tccctgcccggcaagctggccgattgtcaggaaaaggaccccgcgctgagcgaagtcttc
ctggtcgaaggggattcggccggtggctcggccaagcagggacgcgagcggaagaaccag
gccgtgctgcccctgcgcggcaagatcctgaacgtggaacgggcgcggttcgaccggatg
ctgtcctcggaccagatcggcacgctgatcaccgcgcttgggacgggcatcggtcgcgac
gagttcaacatcgcgaagctgcgctaccacaagatcgtcatcatgaccgatgccgacgtc
gacggcgcccatatccgcacgctgcttctgaccttcttcttccggcagatgccggagctg
atcgagcatggctatctttatatcgcgcagccgccgctttacaaagtcgcccgcggcaaa
tccgaggtttacctgaaggatcaggccgccttggaagattaccttgtgcatcaaggggtt
gaaggggcgattctgcggctgggcgacggcaccgacatcatcggcgccgatctgacccgt
ctggtcgaggaagcgcggcaggtgcggcgcatcctgcaggccttcccgacgcattatccg
caacgcatcctggaacaggcggcgattgccggggcgctgctgcccggccggatcgatgcc
gatgcgcagggcgtggccgatgaactttcggcgcggctcgatctgatcgcgctcgaatat
gaacgcggctggatggggcggccgacgcaggatcacgggctgcggatgtcgcgcatcctg
cgcggcgtcgaagaggtgcgcacgctcgatggcccggtgctgcgctctggcgaggcgcgg
cggctgtcgcaattcaccaccagcctgcaggaaagctatcgcgcccccgcccggctgatc
cgcaaggaccgcgagcagttcatccatggcccgctcgatcttttgacggcgatcctgcag
gagggcgaaaagggcctgacgctgcagcgctacaaggggctgggcgagatgaacccggaa
cagctgtgggaaaccacgcttgatcccgcggcgcggacgctgttgcaggtgcgcgtcgat
gacgtggccgaggccgaggacatcttctcgaaactgatgggcgatgtggtggaaccgcgg
cgcgaattcatccagcaaaacgcgctgagcgtggaaaacctcgatttctga |