Rhodobacter capsulatus: RCAP_rcc00126
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Entry
RCAP_rcc00126 CDS
T01213
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00541
Biosynthesis of various nucleotide sugars
rcp01100
Metabolic pathways
rcp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RCAP_rcc00126 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rcp01005
]
RCAP_rcc00126 (kdsB)
Enzymes [BR:
rcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RCAP_rcc00126 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rcp01005
]
Lipid A
RCAP_rcc00126 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ADE83891
UniProt:
D5AKP9
LinkDB
All DBs
Position
complement(132232..133032)
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AA seq
266 aa
AA seq
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MSVLVVIPARYASSRYPGKPLVALRGANGVAKTLIRRSWEAAQAVQGVARVVVATDDDRI
RLEAESFGAEVVMTSPACANGTERCAEAVANLGGGHDIVVNLQGDAPLTPAWFVEDLVAG
LIANPWAELATPVLRCEGAMLAGLIEDRRNDRVGGTTAVFGAGNRGIYFSKEVIPFTGKA
YGPGEPTPVFHHVGVYAYRPGTLAAYSGWPVGPLETLEGLEQLRFLENGRSVLCVEVESR
GRQFWELNNPSDVPKIEAMMAAMGQD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttctggtcgtcatccccgcccgctacgcttcaagccgctatccgggcaaaccg
ctggttgcgttgcggggcgccaacggggtcgccaagaccctgatccggcgcagctgggag
gccgcgcaggcggtgcagggcgtcgcgcgcgtcgtggtggcgaccgacgatgaccgcatc
cgccttgaggccgaaagctttggcgccgaggtggtgatgacttcgcccgcctgcgccaat
ggcaccgaacgctgcgccgaggccgttgccaatctgggcggcggccatgacatcgtggtg
aacctgcagggcgatgcgccgctgacccccgcctggttcgtcgaggatctggtggcgggg
ctgatcgccaacccctgggcggaactggccaccccggttctgcgctgcgaaggcgcgatg
ctggccgggctgatcgaggatcgccgcaacgaccgcgtcggcggcaccactgcggtcttt
ggcgcgggcaaccgcgggatctatttctccaaggaggtgatccccttcaccggcaaagcc
tatggccccggggaaccgaccccggtctttcatcacgtcggcgtctatgcctatcgcccc
gggacgctggcggcctattccggctggccggtcgggccgctcgaaacgctcgaagggctc
gaacagctgcggtttctggaaaacggccgctctgtgctttgcgtcgaggtcgaatcgcgc
gggcggcagttctgggagctgaacaacccctcggacgtgccgaagatcgaggcgatgatg
gccgcgatggggcaggactga
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