KEGG   Rhodobacter capsulatus: RCAP_rcc00278
Entry
RCAP_rcc00278     CDS       T01213                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
rcp  Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcp03016]
    RCAP_rcc00278 (truB)
Enzymes [BR:rcp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     RCAP_rcc00278 (truB)
Transfer RNA biogenesis [BR:rcp03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RCAP_rcc00278 (truB)
 Prokaryotic type
    RCAP_rcc00278 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Robl_LC7
Other DBs
NCBI-ProteinID: ADE84043
UniProt: D5ALX3
LinkDB
Position
315361..316272
AA seq 303 aa
MGRKKGREISGWVVVDKPAGVTSTAVVGKVRWAFDAKKAGHAGTLDPAATGVLAVALGEA
TKTVPFITDALKCYRFQVRFGAATATDDAEGAIVARSDSRPSDAEILAALAAFRGDIMQV
PPQYSAVKVEGERAYDLAREGVDLDLAARPLWVESLEMIARPDADTVELEMVCGKGGYVR
AIARDLGQALGCLGHVLWLRRVWSGPFEADKGLSLETIDRMARTSELDAQLLPLELGLDD
LPEVKATVEGAVRLSHGNPGQVICSGIDFGTEVWVSHHGLAIAVGRYMGGEVHPERVFNR
TGA
NT seq 912 nt   +upstreamnt  +downstreamnt
atgggtcgcaagaagggtcgcgagatttcgggctgggttgtcgtcgacaagcccgcgggg
gtgacctcgaccgcggtcgtgggcaaggtgcgctgggcctttgacgcgaagaaggcgggc
catgcgggcacgcttgatccggcggcgacgggcgttctggcggtggccttgggcgaggcg
acgaagaccgtgcccttcatcaccgatgcgctgaaatgctaccgctttcaggtgcgcttt
ggcgccgcgacggcgaccgacgatgccgagggggcgatcgtggcgcggtccgacagccgc
ccgagcgatgccgagattctggctgcgctggcagcattccgcggcgacataatgcaggtg
ccgccgcaatattccgcggtcaaggtggagggcgaacgcgcctatgatctggcccgcgag
ggggtcgatctggatcttgccgcccgtccgctctgggtcgaaagcctggagatgattgcg
cggcccgatgccgacacggtcgagctcgagatggtctgcggcaagggcggctatgtccgc
gccatcgcccgcgatctggggcaggccctgggctgccttggccatgtgctctggctgcgc
cgggtctggtcgggtccgttcgaggccgacaagggcctgagccttgaaacgatcgaccgg
atggcgcgcacgtccgagctggatgcgcagctgctgccgctggagctggggctcgatgat
ctgcccgaggtcaaggccacggtcgaaggcgcggtgcggctgagccatggcaaccccggt
caggtgatctgctcgggcatcgacttcggcaccgaggtctgggtcagccaccacggtctg
gccattgcggtcggccgttacatgggcggcgaggtccaccccgagcgcgtcttcaaccgg
accggggcatga

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