Rhodobacter capsulatus: RCAP_rcc00278
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Entry
RCAP_rcc00278 CDS
T01213
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcp03016
]
RCAP_rcc00278 (truB)
Enzymes [BR:
rcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RCAP_rcc00278 (truB)
Transfer RNA biogenesis [BR:
rcp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RCAP_rcc00278 (truB)
Prokaryotic type
RCAP_rcc00278 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
ADE84043
UniProt:
D5ALX3
LinkDB
All DBs
Position
315361..316272
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AA seq
303 aa
AA seq
DB search
MGRKKGREISGWVVVDKPAGVTSTAVVGKVRWAFDAKKAGHAGTLDPAATGVLAVALGEA
TKTVPFITDALKCYRFQVRFGAATATDDAEGAIVARSDSRPSDAEILAALAAFRGDIMQV
PPQYSAVKVEGERAYDLAREGVDLDLAARPLWVESLEMIARPDADTVELEMVCGKGGYVR
AIARDLGQALGCLGHVLWLRRVWSGPFEADKGLSLETIDRMARTSELDAQLLPLELGLDD
LPEVKATVEGAVRLSHGNPGQVICSGIDFGTEVWVSHHGLAIAVGRYMGGEVHPERVFNR
TGA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaagaagggtcgcgagatttcgggctgggttgtcgtcgacaagcccgcgggg
gtgacctcgaccgcggtcgtgggcaaggtgcgctgggcctttgacgcgaagaaggcgggc
catgcgggcacgcttgatccggcggcgacgggcgttctggcggtggccttgggcgaggcg
acgaagaccgtgcccttcatcaccgatgcgctgaaatgctaccgctttcaggtgcgcttt
ggcgccgcgacggcgaccgacgatgccgagggggcgatcgtggcgcggtccgacagccgc
ccgagcgatgccgagattctggctgcgctggcagcattccgcggcgacataatgcaggtg
ccgccgcaatattccgcggtcaaggtggagggcgaacgcgcctatgatctggcccgcgag
ggggtcgatctggatcttgccgcccgtccgctctgggtcgaaagcctggagatgattgcg
cggcccgatgccgacacggtcgagctcgagatggtctgcggcaagggcggctatgtccgc
gccatcgcccgcgatctggggcaggccctgggctgccttggccatgtgctctggctgcgc
cgggtctggtcgggtccgttcgaggccgacaagggcctgagccttgaaacgatcgaccgg
atggcgcgcacgtccgagctggatgcgcagctgctgccgctggagctggggctcgatgat
ctgcccgaggtcaaggccacggtcgaaggcgcggtgcggctgagccatggcaaccccggt
caggtgatctgctcgggcatcgacttcggcaccgaggtctgggtcagccaccacggtctg
gccattgcggtcggccgttacatgggcggcgaggtccaccccgagcgcgtcttcaaccgg
accggggcatga
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