Rhodobacter capsulatus: RCAP_rcc00413
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Entry
RCAP_rcc00413 CDS
T01213
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NAD(P)(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00250
Alanine, aspartate and glutamate metabolism
rcp00310
Lysine degradation
rcp00350
Tyrosine metabolism
rcp00650
Butanoate metabolism
rcp00760
Nicotinate and nicotinamide metabolism
rcp01100
Metabolic pathways
rcp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RCAP_rcc00413 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RCAP_rcc00413 (gabD)
00310 Lysine degradation
RCAP_rcc00413 (gabD)
00350 Tyrosine metabolism
RCAP_rcc00413 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RCAP_rcc00413 (gabD)
Enzymes [BR:
rcp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RCAP_rcc00413 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RCAP_rcc00413 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RCAP_rcc00413 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ADE84178
UniProt:
D5AMN9
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Position
440883..442361
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AA seq
492 aa
AA seq
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MLDTVTNLKSLLKDPSLLVTKALVAGDWVDADDGKTFAVTNPARGDVICTVPDLSRAETA
RAIKAAEVAMKDWAARTGKERAAVMRKWFELMMANQEDLALILTAEMGKPLAEARGEIAY
GASFIEWFGEEAKRIYGETIPGHMRDKRITVLKQPIGVVGSITPWNFPNAMIARKAGPAI
AVGCGFVCRPASETPLSALAMGLLGERAGLPKGILSVITSSRASDIGKEFCENHAVRKLT
FTGSTEVGRILMRQAAEQVMKCSMELGGNAPFIVFDDADLDAAVEGAMMSKFRNNGQTCV
CANRIYVQAGVYDTFAEKLAAAVRKLNVVDGLKDGVTTGPLISADAVEKVEEHIADVVAG
GGTIVTGGARHELGGTFFQPTVVTGVTQEMKVATEETFGPVAPLFKFETEAEVIEKANAT
IFGLASYFYARDIGRITRVQEGLEYGIVGVNTGIISTEVAPFGGVKQSGLGREGSHHGVE
DYLELKYICLSI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaccgtcaccaatctgaaatcgctgctcaaggacccgagccttcttgtgacc
aaggccctcgtcgcgggggactgggtcgatgccgatgacggcaagaccttcgcggtgacg
aaccccgcccgcggcgacgtgatctgcaccgtgccggacctgagccgcgccgaaaccgcc
cgcgccatcaaggccgccgaggtcgcgatgaaggactgggccgcccgcaccggcaaggaa
cgcgcggcggtgatgcgcaaatggttcgagctgatgatggcgaaccaggaagacctcgcg
ctgatcctgaccgcggaaatgggcaagccgctggccgaagcccgcggcgagatcgcctat
ggcgcttccttcatcgaatggttcggcgaggaagccaagcgcatctacggcgagacgatc
ccgggccacatgcgcgacaagcgcatcaccgtgctgaaacagccgatcggcgtcgtgggc
agtatcacgccctggaacttcccgaatgcgatgatcgcccgcaaggccggccctgccatc
gccgtgggctgcggcttcgtctgccgtccggcctcggaaacgccgctttcggcgctggcg
atggggcttttgggcgaacgcgccgggctgccgaaggggattctctcggtcatcacctcc
tcgcgcgcctccgacatcggcaaggaattttgcgaaaatcatgcggtgcggaagctgacc
ttcaccgggtccacggaagtcgggcgcatcctgatgcggcaggcggcggagcaggtgatg
aaatgctcgatggagctgggcggcaacgcgcccttcatcgttttcgacgacgccgatctg
gatgcggcggtcgagggcgcgatgatgtcgaagttccgcaacaacggccagacctgcgtc
tgcgcgaaccggatctatgtgcaggcgggcgtctatgacactttcgcggaaaagctggcg
gcggcggtgcgcaagctcaatgtcgtcgacgggctgaaggacggcgtgaccaccgggccc
ttgatctcggccgatgcggtcgagaaggtcgaggaacatatcgccgatgtggtggcgggc
ggcggcaccatcgtcaccggcggcgcgcggcatgaactgggcggcaccttcttccagccg
accgtcgtcaccggcgtcacgcaggagatgaaagtggcgaccgaggaaaccttcggcccg
gtggcgccgctcttcaaattcgagaccgaggccgaggtgatcgaaaaggccaatgccacg
atcttcggtctggcctcctatttctatgcccgtgacatcggccggatcacccgggtgcag
gaagggctggaatacggcatcgtcggcgtgaacaccggcatcatctcgaccgaggtggcg
ccctttggcggcgtcaagcaatcgggcctcgggcgcgagggcagccatcacggcgtcgaa
gactaccttgaactgaaatacatctgcctctcgatctga
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