Rhodobacter capsulatus: RCAP_rcc00493
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Entry
RCAP_rcc00493 CDS
T01213
Symbol
ldc
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00330
Arginine and proline metabolism
rcp00480
Glutathione metabolism
rcp01100
Metabolic pathways
rcp01110
Biosynthesis of secondary metabolites
rcp04148
Efferocytosis
Module
rcp_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RCAP_rcc00493 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RCAP_rcc00493 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RCAP_rcc00493 (ldc)
Enzymes [BR:
rcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RCAP_rcc00493 (ldc)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF397
Motif
Other DBs
NCBI-ProteinID:
ADE84258
UniProt:
D5AMW9
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Position
complement(525042..526187)
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AA seq
381 aa
AA seq
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MGLSKTIWTQPSEIIRTKQPDHPVLVFSPTALQATARRFLKGFPGVVTYAVKSNPDEMVI
QNLVAAGVKGFDVASPFEIDLIRRLAPGAALHYHNPVRGREEIAHAVRAGVKTWSVDSRS
ELDKLIEMVPAEKCEISVRFKLPVQGAAYNFGAKFGATADLAAELLRRAADAGFIPSLTF
HPGTQCTDPAAWEAYILVASEICATAGVRAHRLNVGGGFPNHRKMGPAPVLEDIFALIDR
ATTEAFGSDRPILVCEPGRGLVGDAFTHITKVKALRDDTHVFLNDGVYGGLAELPLIGNI
ERIEVWSPEGFERGGDMVERIVFGPTCDSVDRLPGDVALPAELSEGDYVVFHGMGAYCSA
TNTRFNGFGQMEIVTALALKG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggactttccaaaactatttggactcaaccgtccgaaatcatccgtacgaaacaaccc
gatcatccggtgctggtgttctcgcccaccgcgttgcaggcgaccgcgcggcggttcctc
aagggctttccgggcgtcgtcacctatgcggtgaagtcgaacccggatgaaatggtgatc
cagaaccttgtcgccgcgggcgtcaaggggttcgacgtcgcctcgcccttcgagatcgat
ctcatccgtcgtctcgcccccggggccgcgctgcattaccacaacccggtccgcgggcgc
gaggaaatcgcccatgcggtgcgggcaggggtgaagacctggtcggtcgattcgcgctcg
gagctggacaagctgatcgagatggtgcccgccgagaagtgcgaaatctcggtgcgcttc
aagctgccggtgcagggggccgcctacaacttcggcgccaagttcggcgccaccgcggat
ctggcggcggaattgctgcgccgcgccgcggacgccgggttcatcccctcgctcaccttc
cacccgggcacgcaatgcaccgatccggccgcctgggaggcctatatcctcgtcgcctcg
gaaatctgtgcgacggcgggggtgcgggcgcatcggctgaacgtcggcggcggcttcccg
aaccatcgcaagatgggcccggcgccggtgctcgaggacatcttcgcgctgatcgaccgc
gccacgaccgaggctttcggctctgaccgtccgattctggtctgcgaacccggccgcggg
ctggtgggcgatgccttcacccatatcaccaaggtcaaggcgctgcgcgacgacacgcat
gtgttcctgaacgacggtgtctatggcggtctggcggaactgccgctgatcggcaacatc
gagcggatcgaggtctggtcgcccgaggggttcgaacgcggcggcgacatggtcgagcgc
atcgtcttcggcccgacctgcgattcggtcgaccggctgccgggggatgtcgcccttccc
gccgaactgtccgagggcgattacgtggtgttccacggcatgggtgcctattgctcggcc
accaacacccggttcaacggcttcgggcagatggaaatcgtcaccgcgctggcgctgaaa
ggctga
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