Rhodobacter capsulatus: RCAP_rcc00531
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Entry
RCAP_rcc00531 CDS
T01213
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00220
Arginine biosynthesis
rcp00240
Pyrimidine metabolism
rcp00250
Alanine, aspartate and glutamate metabolism
rcp01100
Metabolic pathways
rcp01110
Biosynthesis of secondary metabolites
rcp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RCAP_rcc00531 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RCAP_rcc00531 (carB)
00220 Arginine biosynthesis
RCAP_rcc00531 (carB)
Enzymes [BR:
rcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RCAP_rcc00531 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp
Dala_Dala_lig_C
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADE84296
UniProt:
D5AN07
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Position
complement(568870..572202)
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AA seq
1110 aa
AA seq
DB search
MPKRTDIQSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTSLALADMGVLEKFGVELIGANR
EAIEMAEDRKLFREAMDRIGLENPKATIISAPKLENGKYDISAGVRQALIDLEHIGLPAI
IRPAFTLGGTGGGVAYNRDDYEAIVRSGLDASPVAQVLIDESLLGWKEYEMEVVRDKADN
AIIVCSIENVDPMGVHTGDSITVAPALTLTDKEYQIMRNGSIAVLREIGVETGGSNVQWA
INPKDGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITKVTPASF
EPTIDYVVTKIPRFAFEKFPGSKPELTTAMKSVGEAMAIGRTFHESVQKALASMETGLTG
FDEIAIEGAPDKAAVIKAISRQTPDRMRLIAQAMRHGLSDEEIVTATAFDPWFLARIREI
VEAEAAIRKNGLPLDEKGLRKLKMMGFTDARLAKLTGRDEGQVRRARRNLGVTAVFKRID
TCAAEFEAQTPYMYSTYEVPAMGDVECEARPSDRKKVVILGGGPNRIGQGIEFDYCCCHA
CFALTKAGYETIMINCNPETVSTDYDTSDRLYFEPLTLEHVLEILRVEQDNGTLHGVIVQ
FGGQTPLKLANALEAEGIPILGTTPDAIDLAEDRERFQQLLNDLELKQPVNGIASTEAQA
FEIAGRVGYPLVIRPSYVLGGRAMEIVRDTEHLKRYITTAVTVSGDSPVLLDSYLSGAIE
VDVDALSDGKTVHVAGIMQHIEEAGVHSGDSACSLPPYSLSRETVAELKAQTEKMALALG
VVGLMNVQFAIKDGVIYVLEVNPRASRTVPFVAKATDSAIASIAARLMAGEPMANFPLRA
AYPEGVGPETPLPFADPLTLADPNTPWFSVKEAVLPFARFPGVDTLLGPEMRSTGEVMGW
DRNFPRAFLKAQMGAGTHLPESGRVFLSIKDADKSDDLANAARDLIAMGFTLVATRGTGA
WLKEKGVEAEAVNKVYEGRPNIVDRLKNGDIALVFNTTDGNQSVSDSREIRAVALYDKIP
YFTTAAASIAAVAAMKSRAEGEISVRPLQA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagaaccgacatccagtccatcctcatcatcggcgccggtcccatcatcatc
gggcaggcctgcgaattcgactattccggcgcgcaagcctgcaaggccctgcgggaagaa
ggctaccgggtcattctggtgaactcgaacccggcgacgatcatgaccgacccggaaatg
gccgatgcgacctatatcgagccgatcacccccgaggtcgtggcgaagatcatcgaaaag
gaacgccccgacgcgcttttgccgacgatgggcgggcagaccggcctgaacacctcgctt
gccttggccgacatgggcgtgctggagaaattcggggtcgagctgatcggcgccaaccgc
gaggccatcgagatggccgaagaccgcaagcttttccgcgaggcgatggaccggatcggg
ctggaaaacccgaaagccacgatcatctcggcgccgaagctggaaaacggcaaatacgac
atctcggccggcgtgcgtcaggcgctgatcgatctggaacatatcggcctgcccgcgatc
atccgcccggcctttacccttggcggcaccggcggcggcgtcgcctataaccgcgacgat
tacgaggccatcgtgcgctcgggccttgatgcttcgcccgtggcgcaggtgctgatcgat
gaatcgctgctgggctggaaagaatacgagatggaggttgtccgcgacaaagccgacaat
gccatcatcgtctgctcgatcgaaaacgtcgatccgatgggcgtgcacaccggcgattcc
atcaccgtcgccccggcgctgacgctgaccgacaaggaatatcagatcatgcgcaacggc
tcgattgccgttctgcgcgaaatcggtgtcgaaaccggcggctcgaacgtgcaatgggcg
atcaacccgaaagacgggcgcatggtggtgatcgagatgaacccgcgggtgtcgcggtcc
tcggcgctggcctcgaaagccacgggtttcccgattgcgaagatcgcggcgaaactggcc
gtcggctacacgctcgatgaacttgacaacgacatcaccaaggtcacgcccgcgtccttc
gaacccaccatcgactatgtcgtgaccaagatcccgcgctttgcgttcgagaaattcccc
ggttccaagcccgagctgaccaccgcgatgaaatcggtgggcgaggcgatggcgattggc
cggaccttccacgaatcggtgcaaaaggcgctggcctcgatggaaaccggcctgaccggc
tttgacgaaatcgccatcgagggcgcgcccgacaaggccgccgtgatcaaggcgatctcg
cgtcagaccccggaccggatgcggctgattgcgcaggcgatgcgccacgggctgagcgac
gaggaaatcgtcaccgccaccgcctttgatccgtggttcctcgcccgcatccgcgaaatc
gtcgaggccgaggccgcgatccgcaagaacggcctgccgcttgatgaaaagggcctgcgc
aagctgaagatgatgggcttcaccgatgcgcgtctggcgaaactgaccggccgcgacgag
ggtcaggtccgccgcgcgcggcgcaatctgggcgtcaccgccgtcttcaagcgcatcgac
acctgcgccgccgaattcgaggcgcagaccccctacatgtattcgacctatgaagtcccg
gcgatgggcgatgtcgaatgcgaggcccggccctcggaccgcaagaaggtcgtcatcctg
ggcggtggcccgaaccggatcggtcaggggatcgaattcgattactgctgctgccatgcc
tgcttcgcgctgacgaaggcgggttatgaaaccatcatgatcaactgcaacccggaaacg
gtgtcgaccgactatgacacctcggaccggctctatttcgagccgctgacgctggaacat
gtgctggaaatcctgcgcgtcgaacaggataacggcacgctgcacggcgtgatcgtgcaa
ttcggcggccagacgccgctgaagctcgcgaatgcgctggaagccgaggggattccgatc
ctgggcaccacgccggacgccatcgacctcgccgaagaccgcgagcgcttccagcagctg
ctcaacgatctggagctgaagcagccggtcaacggcatcgcctcgaccgaggcgcaagcc
tttgaaattgcgggccgtgtcggctatccgctggtcattcgcccgtcctatgttctgggc
ggccgcgccatggaaatcgtccgcgacaccgagcatctgaaacgctacatcaccaccgcc
gtcaccgtctcgggcgacagcccggttctgctcgacagctatctttcgggcgcgatcgag
gtggatgtggatgcgctctcggatggcaagaccgtccatgtcgcggggatcatgcagcat
atcgaggaagcgggcgtccattcgggcgattccgcctgctcgctgccgccctattcgctc
tcgcgcgagaccgtggcggagctgaaagcccagaccgagaaaatggcgctggcgcttggc
gtcgtcgggctgatgaacgtgcaattcgcgatcaaggacggggtgatctatgtgctggag
gtgaacccgcgcgccagccgcaccgtgcccttcgtcgccaaggcgaccgacagcgccatt
gcctcgatcgcggcgcggctgatggcgggcgagccgatggcgaatttcccgctgcgcgcc
gcctatcccgaaggtgtcggcccggagacccccctgcccttcgccgatccgctgaccttg
gccgatccgaacacgccctggttctcggtcaaggaagcggtgctgccctttgcccgcttc
ccgggtgtcgatacgctgcttgggccggaaatgcgctcgaccggcgaggtgatgggctgg
gaccgcaacttcccgcgcgccttcctcaaggcgcagatgggcgcgggcacgcatctgccg
gaaagcggccgggtgttcctgtcgatcaaggatgccgacaagtcggacgatctggccaat
gccgcccgcgatctgatcgcgatgggcttcacgctcgttgccacccgtggcaccggcgcc
tggctgaaggaaaagggcgtcgaggccgaggcggtgaacaaggtctacgagggccgtccg
aacatcgtcgaccggctcaagaacggcgatatcgcgctggtcttcaacaccaccgatggc
aaccagtcggtgtcggacagccgcgagatccgcgccgtcgcgctttacgacaagatcccc
tatttcaccaccgccgccgcctccatcgccgccgtcgccgcgatgaagagccgcgccgag
ggcgaaatctcggtccggccgctgcaggcgtaa
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