KEGG   Rhodobacter capsulatus: RCAP_rcc00600
Entry
RCAP_rcc00600     CDS       T01213                                 
Symbol
nrdJ1
Name
(GenBank) ribonucleoside-diphosphate reductase NrdJ-1 (adenosylcobalamin-dependen)
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rcp  Rhodobacter capsulatus
Pathway
rcp00230  Purine metabolism
rcp00240  Pyrimidine metabolism
rcp01100  Metabolic pathways
rcp01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RCAP_rcc00600 (nrdJ1)
   00240 Pyrimidine metabolism
    RCAP_rcc00600 (nrdJ1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcp03400]
    RCAP_rcc00600 (nrdJ1)
Enzymes [BR:rcp01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RCAP_rcc00600 (nrdJ1)
DNA repair and recombination proteins [BR:rcp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RCAP_rcc00600 (nrdJ1)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN TSCPD RNR-II_ins_dom Zn_ribbon_8 Zn_ribbon_RRN7 Zn_ribbon_IS1595
Other DBs
NCBI-ProteinID: ADE84365
UniProt: D5ANL1
LinkDB
Position
642199..644466
AA seq 755 aa
MTRFAAPIAEQIWDMKYRLKDADGLPLDASVEDSWRRVARDLASVEADPAHWEPKFYAAL
EDFKFLPAGRILAGAGTGRAVTLFNCFVMGTIPDSMAGIFDMLKEAALTMQQGGGIGYDF
STIRPRGAAVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIT
AKQDSARLRMFNLSVLITDAFMEAVKADGPWELVFDGKVYHTLNARDLWNKIMRATYDFA
EPGVIFIDRINAMNNLAYLEQIAATNPCGEQPLPPYGACLLGSVNLARLVTAPFTDQARL
DLAALDELVRTSVRMMDNVVDASRFPLPQQQAEAANKRRIGLGVTGLADALLMLGLRYGD
DKAAAQTEAWMKAIARAAYLASVDLAREKGAFPLFDAEKYLSSGNMLQMDEDVRQAIATH
GIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVKLWR
DMKGDVALPAYFVNAQTLAPMDHVKMQAAAQKWIDSSISKTINCPVDISFDDFKDVYMAA
FESGCKGCTTYRPNDVTGSVLTVSEKSEKTPETDKGAEVVYLTEPLDRPASLEGATYKLK
WPGSEHAIYITVNDIVQGGHRRPFEVFINSKNMEHYAWTVALTRMISAVFRRGGDVSFVV
GELKAVFDPRGGAWMAGQYIPSILAAIGGVIERHLVATGFIAGEGMGLKSDPRAEVMEMG
EPPRGEACPSCGSYALRKVEGCLTCADCGHSKCSG
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgacccgttttgccgcccccatcgccgaacagatctgggacatgaaataccggctgaaa
gatgccgacggcctgccgctggatgcgtcggtcgaagacagctggcgccgggtggcccgc
gatctggcctcggtcgaagccgatccggcgcattgggagccgaaattctacgccgcgctg
gaagatttcaaattcctgcccgcggggcggattctggcgggcgcggggaccggccgggcg
gtgaccctgttcaactgcttcgtcatgggcacgatccccgattcgatggccggcattttc
gacatgctgaaggaagcggcgctgacgatgcagcagggcggcggcatcggctatgatttc
tcgacgatccggccgcgcggcgcggcggtgaagggggtggcggccgatgcctcggggccg
ctgtccttcatggatgtctgggatgcgatgtgccgcacgatcatgtcggcgggctcgcgc
cgcggcgcgatgatggcgacgatgcgctgcgaccatcccgatatcgaggccttcatcacc
gcgaaacaggattcggcccggctgcggatgttcaacctctcggtgctgatcaccgatgct
ttcatggaagcggtgaaggccgatggtccgtgggagctggtctttgacggcaaggtctat
cacacgctgaacgcccgcgatctgtggaacaagatcatgcgcgcgacctatgatttcgcg
gaacccggggtgatcttcatcgaccggatcaacgcgatgaacaacctcgcctatctggag
cagatcgcggcgacgaacccctgtggcgagcagccgctgccgccctatggcgcctgtctg
ctgggctcggtgaacctcgcgcggctggtcacggcgcctttcaccgatcaggcccggctg
gatctggcggcgctcgatgagctggtgcggacctcggtgcggatgatggacaatgtcgtc
gatgccagccgtttcccgctgccgcaacagcaggccgaggccgcgaacaagcgccggatc
gggcttggggtgacggggctggccgatgcgcttttgatgctggggctgcgctatggcgac
gacaaggccgcggcgcagaccgaagcctggatgaaggcgattgcccgggcggcctatctc
gcctcggtcgatctggcgcgggaaaagggcgctttcccgctcttcgatgccgagaaatat
ctgagcagcggcaacatgctgcagatggacgaggatgtgcggcaggcgattgccacgcat
gggatccgcaatgcgctgcttacctcgatcgcgccgacggggacgatttcgctttatgcg
ggcaacgtgtcttcgggcatcgagccggtctttgcctatgcctatacgcgcaaggtgctg
caaaaggatggctcgcggaccgaggaagaggtggtcgattacgcggtgaagctgtggcgg
gacatgaagggcgacgtggcgctgcccgcgtatttcgtcaacgcccagacgctggcgccg
atggatcacgtcaagatgcaggcggcggcgcagaaatggatcgattcgagcatctcgaaa
acgatcaactgcccggtggacatttctttcgacgatttcaaggatgtctacatggcggcc
tttgaaagcggctgcaagggctgcaccacctaccgcccgaatgacgtgacggggtcggtt
ttgacggtttcggaaaagtccgaaaagacccccgagaccgacaagggcgccgaggtggtc
tatctgaccgaaccgctggatcggcccgcgtcgctggagggggcgacctacaagctgaaa
tggccgggctcggaacatgcgatctacatcacggtgaacgacatcgtgcagggcgggcat
cgccgtcccttcgaggttttcataaattccaagaatatggaacattacgcctggacggtg
gcgctgacgcggatgatctcggcggtgttccggcgcggcggggatgtgagcttcgtcgtg
ggcgagctgaaggcggtcttcgatccgcgcggcggcgcctggatggcggggcaatacatc
ccgtcgatcctggcggcgatcggcggcgtgatcgagcggcatctggtggcgacgggcttc
atcgcaggcgaggggatgggtctgaaaagcgatccccgcgccgaggtgatggaaatgggc
gagccgccgagaggagaggcctgcccgtcctgcggcagctacgcgctgcgcaaggtggaa
ggctgcctgacctgcgccgactgcggccattcgaagtgctcgggttga

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