Rhodobacter capsulatus: RCAP_rcc00852
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Entry
RCAP_rcc00852 CDS
T01213
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
Organism
rcp
Rhodobacter capsulatus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADE84617
UniProt:
D5AQ30
LinkDB
All DBs
Position
complement(943181..944827)
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AA seq
548 aa
AA seq
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MTKFTDLKLDPAVLRAIADAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM
VTMLSSGRARARMPRSLVLCPTRELAAQVAENFDTYAKYTRLTKALLIGGVSFGEQDKLI
DRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFQLTPFTRQ
TLFFSATMAPEIERITNTFLHAPARIEVARQATTSETITQKLIQITPPRRDQSAKAKREL
LRAIIKSEGEACTNAIIFCNRKTDVDIVAKSLKTHGFNAAPIHGDLDQSLRTKTLDAFRD
GSLQLLIASDVAARGLDIPAVSHVFNYDLPSHAEDYVHRIGRTGRAGRLGTAYSIGTPAD
AKYLAAIEALVKQEIPRADPPEGFSLSEAAHREPRKYDDDKGPKSRSSRSRSGRGRDEKR
PPREDRAPVIVAVEEDDSHIVEVPEAKRAEPRRSEPRRNDGPRSESHRAEPIRPDGPRED
RRDERRSEPYRDSRRGRDGGPAVVGMGDHVPDFLLRSFRTTKPVIEDKDSDEAPEAELET
PVTEPSEG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtttaccgatctcaagcttgaccctgccgtgctgcgtgccatcgcggacgcc
ggatacgaaacgcccaccccgatccaggccggcgccattccgcccgcgctcgaaggccgc
gacgtgctgggcatcgcccagaccggcaccggcaagaccgcctccttcaccctgccgatg
gtcaccatgctgtcctcgggccgggcccgggcgcggatgccgcgttcgctcgtgctttgc
ccgacccgcgaactggcggcgcaggtggccgagaacttcgacacctacgcgaaatacacc
aggctgaccaaggcgctgctcatcggcggcgtgtcctttggcgaacaggacaagctgatc
gaccgcggcgtcgacgtgctgatcgccacgcccgggcggcttctggaccatttcgagcgc
ggcaagcttttgctgaccggcgtgcagatcatggtggtcgacgaggccgaccggatgctc
gacatgggcttcatcccggatatcgagcggatcttccagctgacccccttcacccggcag
acgctgttcttcagtgccacgatggcgccggaaatcgagcgcatcaccaacaccttcctg
catgcgcccgcgcgcatcgaagtggcgcggcaggcgacgacctcggaaacgatcacgcaa
aagctgatccagatcacgccgccgcgccgcgaccagtcggccaaggcgaaacgcgaactt
ctgcgcgcgatcatcaagtccgagggcgaggcctgcaccaacgcgatcatcttctgcaac
cgcaagaccgatgtcgatatcgtggcgaagtcgctgaaaacgcacgggttcaacgccgcg
ccgatccatggcgatctggaccagagcctgcgcacgaagacgctggacgcgttccgcgat
ggctcgttgcagcttctgatcgcctcggatgtcgccgcgcggggccttgatattccggcc
gtcagccatgtcttcaactacgacctgcccagccatgccgaggattacgtccaccgcatc
ggccgcaccggccgcgccgggcgtctgggcacggcctattcgatcggcacgcccgcggat
gcgaaatatctggccgcgatcgaggccctggtgaagcaggaaattccccgcgccgatccg
cccgaagggttctcgctgtcggaagccgcgcatcgcgagccgcgcaagtatgacgatgac
aaggggccgaaatcgcgctcctcgcggtcgcgctcgggtcggggtcgcgacgagaaacgc
ccgccgcgcgaagaccgcgccccggtgatcgtcgccgtcgaggaagacgactcgcatatc
gtcgaggtgcccgaggcgaaacgggccgagccgcgtcgttcggaaccgcgccggaatgac
ggcccgcggtcggagagccaccgcgccgagccgatccgtccggacggcccgcgcgaggat
cgccgcgacgaacgccggtcggaaccctatcgcgacagccgtcgtggccgcgatggcggg
cctgccgtcgtcggcatgggcgatcacgtgccggatttcctgttgcggtcgtttcgcacc
acgaagccggtgatcgaggacaaggacagcgacgaggcccccgaggccgagctggaaacc
ccggtcacggaaccctcggaaggctga
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