Rhodobacter capsulatus: RCAP_rcc01290
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Entry
RCAP_rcc01290 CDS
T01213
Name
(GenBank) UvrD/REP helicase family protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc01290
Enzymes [BR:
rcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCAP_rcc01290
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RCAP_rcc01290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADE85045
UniProt:
D5ASF4
LinkDB
All DBs
Position
1373229..1376378
Genome browser
AA seq
1049 aa
AA seq
DB search
MTDLTLVPAGAGAGKTTRIQRTVAGWVSAGLVAPGRILAVTFTEAAAAELKARIRAQLIA
QDQVAEALELERAYIGTIHGLGQRLLTEHAFGAGRAPVSRLLTEAERDLLIRLQMGGCGP
LQEVMGDLARFGYAWNRQTGASAEDQFRADVLRTIDLLRGLGARGASPDVLAGALAALDA
GYGPRAAEGAPLTDALRRAAQALLARFPEGIADQATSDAAIKAFRDDHARLRRAAETDAL
NSDWGLWQKLRTLRQSKRGAPTPEGYDALAQGVMEAAEALLIHPGPLTDARAHLAALIHG
AQALMAGYDAAKRAGGLIDFADMITETEALLAARPEILAATLGEIDCVVIDEFQDTNPVQ
FSLLWRLARGAARALIVGDTKQAIMRFQGADPRLSGALHAACPEAVDPLDHNYRSDPRIM
RFVNALGPVLFPEGYDALAPHRAETGVPALEALVLPKAKKDVSAPCIAAHVAALLHEGAQ
VSDRATGQLRAAQPSDVAVLCYTAAKAASVAKALRAEGFAVRIQADGWRAAPIIRVVRAA
LALVADPEDSHAALRYLTLGPARLPLQAALTLAIDGALATHAGLAPLLSLAEDAPHLTVA
ALLSKIIPAAGLRDWAATLEAPAQALADLARFEAEAQAFDALAADLKAAAGFHGASAQVF
LGWLAAQTGRDVDRHPDAAGWSAPGIEICTWHAAKGREWPITVVAGLDYKFIARPNTLRA
EFDGFDDLDAVLDHAGLGWLPDFAAPEKQAAFAEALVADDERDAARELYVALTRARDRLI
LALPTAPSKEKPRPERMVDLLRARSGLATTTDGTGLTICGESFPARVVMAADPDAGAEAA
PDPQPVPRFGLARPHPGTPLRLWRTTPSGLIAPADAARPNLRLIALGAAVRRQRDGFDLA
TERGSAWHLAFRVAAERPERLAEVGPATGLAPDTVAQIAAQAAALRHWLLAEGFDRLHFE
LPLQEIAADGSEINAIVDLLAEGPQGLLIVDHKSGACPYPEARFAGYASQLQAYAGLAER
AFAKPVRGLAVNWMNEGEVSVLDLQEVPA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctgacgcttgttcctgctggcgccggggccggcaagaccacccgcatccag
cgcaccgtggcgggctgggtcagcgcgggtctggtcgcgccggggcgcattctggcggtg
accttcaccgaggcggcggcggcggaactcaaggcgcgcatccgcgcccaactgatcgcg
caagatcaggtcgccgaggcgcttgagttggaacgcgcctacatcggcacgatccacggc
cttggccagcggctcttgacggaacatgccttcggcgccgggcgcgcaccggtcagccgg
ctgctgaccgaagccgaacgcgatctgctgatccggctgcagatgggcggctgtggtccg
ctgcaagaggtgatgggcgatcttgcgcggtttggctacgcgtggaaccggcagaccggg
gccagcgccgaggatcagttccgcgccgatgtgctgcgcacgatcgatctgttgcgcggg
cttggcgcgcggggcgcgagccccgatgtgctggcgggcgcgcttgcggcgcttgacgcc
ggatacggcccgcgcgcagctgaaggtgcccccctgactgacgcgttgcgccgcgccgcg
caggcattgctggcgcggtttcccgaagggatcgccgatcaggccacgagcgatgcggcg
atcaaggccttccgcgacgaccatgcccggttgcgccgcgccgccgaaaccgatgcgctc
aacagcgactggggcctgtggcagaagttgcgcacgctgcgccaatcgaaacgcggtgcc
cccacgcccgagggctatgacgcgctcgcgcagggggtgatggaggcggccgaggcgctg
ctgatccatcccggcccgctcaccgatgcccgcgcgcatctggccgcgctgatccacggc
gcgcaggctcttatggcgggctatgacgcggccaaacgcgcgggcgggctgatcgatttc
gccgacatgatcaccgagaccgaggcgctgctcgcggcccgccccgagatccttgccgcg
acgctgggcgagatcgactgcgtggtgatcgacgagtttcaggacaccaacccggtgcaa
ttctcgctgctgtggcggctcgcgcggggggcggcccgcgcgctgatcgtgggtgatacg
aaacaggcgatcatgcggtttcagggcgccgatccgcggctttcgggcgccctgcacgcg
gcctgccccgaggcggtcgatccgcttgatcacaattaccgctccgatccgcggatcatg
cgtttcgtcaacgcgcttggcccggtgctgtttcccgaaggctacgacgcacttgcgccc
catcgcgccgaaaccggcgttcccgcgctcgaggcgctggtgctgccgaaggcgaaaaag
gatgtcagcgcgccgtgcatcgcggcccatgtcgcggcgctgctgcacgagggggcgcag
gtgagcgaccgtgccacaggccagttgcgcgcggcgcagccctcggatgtggcagtgctg
tgctacaccgccgccaaggcggccagcgtcgccaaggccctgcgtgccgaaggatttgcg
gtgcgaattcaagccgatggctggcgtgccgcgccgatcatccgggtggtgcgggcggcg
ttggcgctggtggctgaccccgaggacagccatgccgcgctgcgctatctcacccttggt
ccggcgcgcttgccgctgcaagccgcgttgacgcttgcgatcgatggcgcgcttgcgacc
catgccgggctggcgccgctcttgtcgctggccgaggacgccccgcatctgaccgtcgcg
gcgctgctgtcgaaaatcatcccggcggcgggtctgcgcgactgggccgcaacgctcgag
gcgcccgcgcaggcgctggccgatctggcccggttcgaggccgaggcgcaggccttcgac
gcgctcgccgccgatctgaaggcggcggcggggtttcatggcgcctcggcgcaggtgttt
ctgggctggcttgcggcacagaccgggcgcgatgtcgaccgccatcccgatgccgccggc
tggtccgcgccggggatcgagatctgcacctggcatgccgcgaaggggcgggaatggccg
atcaccgtggtggccgggctcgattacaagttcatcgcccgtcccaataccctgcgcgcc
gaattcgacggtttcgacgatctggatgcggtgctagatcatgccgggctcggctggctg
cccgattttgcagcgcccgaaaagcaggcggcctttgccgaggcgctggtggctgacgac
gaacgcgacgctgcgcgtgaactctatgtggcgctgacccgggcgcgcgaccggctgatc
ctcgccctgccgactgcaccctcgaaggaaaagccgcgcccggagcggatggtcgatctg
ctgcgcgcccgcagcgggcttgctaccaccaccgacggcacgggcctgacgatctgcggc
gaaagcttcccggcgcgggtggtgatggccgccgatcctgacgctggcgccgaggctgcc
cccgatccgcagccggtgccgcgctttgggcttgcccgcccgcatcccggcacgccactg
cggctttggcgcaccaccccctcgggtctcattgcgcccgcagatgccgcccggcccaac
ctgcgcctcatcgcccttggcgcagcggtgcggcgtcagcgcgacggcttcgatctggcg
accgagcgcggttcggcctggcaccttgcctttcgcgtcgccgccgagcgccccgaacgt
ctggccgaggtcggccccgccaccggtcttgcccccgacaccgtggcccagatcgcggcg
caggcggcggctctgcggcactggcttctggccgaggggtttgaccggctgcatttcgaa
ctgcccttgcaggaaatcgctgccgatggctcggagatcaacgccatcgtcgatcttctg
gccgaggggccgcaggggctgttgatcgtcgatcacaaatccggcgcctgtccctacccc
gaggcgcgctttgccggctatgcctcgcagctgcaggcttatgccggtctggccgaacgc
gcctttgccaagccggtgcgggggcttgcggtgaactggatgaacgagggtgaggtctcg
gtgctcgatcttcaggaggtcccggcctga
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