KEGG   Rhodobacter capsulatus: RCAP_rcc01290
Entry
RCAP_rcc01290     CDS       T01213                                 
Name
(GenBank) UvrD/REP helicase family protein
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
rcp  Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcp03400]
    RCAP_rcc01290
Enzymes [BR:rcp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RCAP_rcc01290
DNA repair and recombination proteins [BR:rcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     RCAP_rcc01290
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: ADE85045
UniProt: D5ASF4
LinkDB
Position
1373229..1376378
AA seq 1049 aa
MTDLTLVPAGAGAGKTTRIQRTVAGWVSAGLVAPGRILAVTFTEAAAAELKARIRAQLIA
QDQVAEALELERAYIGTIHGLGQRLLTEHAFGAGRAPVSRLLTEAERDLLIRLQMGGCGP
LQEVMGDLARFGYAWNRQTGASAEDQFRADVLRTIDLLRGLGARGASPDVLAGALAALDA
GYGPRAAEGAPLTDALRRAAQALLARFPEGIADQATSDAAIKAFRDDHARLRRAAETDAL
NSDWGLWQKLRTLRQSKRGAPTPEGYDALAQGVMEAAEALLIHPGPLTDARAHLAALIHG
AQALMAGYDAAKRAGGLIDFADMITETEALLAARPEILAATLGEIDCVVIDEFQDTNPVQ
FSLLWRLARGAARALIVGDTKQAIMRFQGADPRLSGALHAACPEAVDPLDHNYRSDPRIM
RFVNALGPVLFPEGYDALAPHRAETGVPALEALVLPKAKKDVSAPCIAAHVAALLHEGAQ
VSDRATGQLRAAQPSDVAVLCYTAAKAASVAKALRAEGFAVRIQADGWRAAPIIRVVRAA
LALVADPEDSHAALRYLTLGPARLPLQAALTLAIDGALATHAGLAPLLSLAEDAPHLTVA
ALLSKIIPAAGLRDWAATLEAPAQALADLARFEAEAQAFDALAADLKAAAGFHGASAQVF
LGWLAAQTGRDVDRHPDAAGWSAPGIEICTWHAAKGREWPITVVAGLDYKFIARPNTLRA
EFDGFDDLDAVLDHAGLGWLPDFAAPEKQAAFAEALVADDERDAARELYVALTRARDRLI
LALPTAPSKEKPRPERMVDLLRARSGLATTTDGTGLTICGESFPARVVMAADPDAGAEAA
PDPQPVPRFGLARPHPGTPLRLWRTTPSGLIAPADAARPNLRLIALGAAVRRQRDGFDLA
TERGSAWHLAFRVAAERPERLAEVGPATGLAPDTVAQIAAQAAALRHWLLAEGFDRLHFE
LPLQEIAADGSEINAIVDLLAEGPQGLLIVDHKSGACPYPEARFAGYASQLQAYAGLAER
AFAKPVRGLAVNWMNEGEVSVLDLQEVPA
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgactgatctgacgcttgttcctgctggcgccggggccggcaagaccacccgcatccag
cgcaccgtggcgggctgggtcagcgcgggtctggtcgcgccggggcgcattctggcggtg
accttcaccgaggcggcggcggcggaactcaaggcgcgcatccgcgcccaactgatcgcg
caagatcaggtcgccgaggcgcttgagttggaacgcgcctacatcggcacgatccacggc
cttggccagcggctcttgacggaacatgccttcggcgccgggcgcgcaccggtcagccgg
ctgctgaccgaagccgaacgcgatctgctgatccggctgcagatgggcggctgtggtccg
ctgcaagaggtgatgggcgatcttgcgcggtttggctacgcgtggaaccggcagaccggg
gccagcgccgaggatcagttccgcgccgatgtgctgcgcacgatcgatctgttgcgcggg
cttggcgcgcggggcgcgagccccgatgtgctggcgggcgcgcttgcggcgcttgacgcc
ggatacggcccgcgcgcagctgaaggtgcccccctgactgacgcgttgcgccgcgccgcg
caggcattgctggcgcggtttcccgaagggatcgccgatcaggccacgagcgatgcggcg
atcaaggccttccgcgacgaccatgcccggttgcgccgcgccgccgaaaccgatgcgctc
aacagcgactggggcctgtggcagaagttgcgcacgctgcgccaatcgaaacgcggtgcc
cccacgcccgagggctatgacgcgctcgcgcagggggtgatggaggcggccgaggcgctg
ctgatccatcccggcccgctcaccgatgcccgcgcgcatctggccgcgctgatccacggc
gcgcaggctcttatggcgggctatgacgcggccaaacgcgcgggcgggctgatcgatttc
gccgacatgatcaccgagaccgaggcgctgctcgcggcccgccccgagatccttgccgcg
acgctgggcgagatcgactgcgtggtgatcgacgagtttcaggacaccaacccggtgcaa
ttctcgctgctgtggcggctcgcgcggggggcggcccgcgcgctgatcgtgggtgatacg
aaacaggcgatcatgcggtttcagggcgccgatccgcggctttcgggcgccctgcacgcg
gcctgccccgaggcggtcgatccgcttgatcacaattaccgctccgatccgcggatcatg
cgtttcgtcaacgcgcttggcccggtgctgtttcccgaaggctacgacgcacttgcgccc
catcgcgccgaaaccggcgttcccgcgctcgaggcgctggtgctgccgaaggcgaaaaag
gatgtcagcgcgccgtgcatcgcggcccatgtcgcggcgctgctgcacgagggggcgcag
gtgagcgaccgtgccacaggccagttgcgcgcggcgcagccctcggatgtggcagtgctg
tgctacaccgccgccaaggcggccagcgtcgccaaggccctgcgtgccgaaggatttgcg
gtgcgaattcaagccgatggctggcgtgccgcgccgatcatccgggtggtgcgggcggcg
ttggcgctggtggctgaccccgaggacagccatgccgcgctgcgctatctcacccttggt
ccggcgcgcttgccgctgcaagccgcgttgacgcttgcgatcgatggcgcgcttgcgacc
catgccgggctggcgccgctcttgtcgctggccgaggacgccccgcatctgaccgtcgcg
gcgctgctgtcgaaaatcatcccggcggcgggtctgcgcgactgggccgcaacgctcgag
gcgcccgcgcaggcgctggccgatctggcccggttcgaggccgaggcgcaggccttcgac
gcgctcgccgccgatctgaaggcggcggcggggtttcatggcgcctcggcgcaggtgttt
ctgggctggcttgcggcacagaccgggcgcgatgtcgaccgccatcccgatgccgccggc
tggtccgcgccggggatcgagatctgcacctggcatgccgcgaaggggcgggaatggccg
atcaccgtggtggccgggctcgattacaagttcatcgcccgtcccaataccctgcgcgcc
gaattcgacggtttcgacgatctggatgcggtgctagatcatgccgggctcggctggctg
cccgattttgcagcgcccgaaaagcaggcggcctttgccgaggcgctggtggctgacgac
gaacgcgacgctgcgcgtgaactctatgtggcgctgacccgggcgcgcgaccggctgatc
ctcgccctgccgactgcaccctcgaaggaaaagccgcgcccggagcggatggtcgatctg
ctgcgcgcccgcagcgggcttgctaccaccaccgacggcacgggcctgacgatctgcggc
gaaagcttcccggcgcgggtggtgatggccgccgatcctgacgctggcgccgaggctgcc
cccgatccgcagccggtgccgcgctttgggcttgcccgcccgcatcccggcacgccactg
cggctttggcgcaccaccccctcgggtctcattgcgcccgcagatgccgcccggcccaac
ctgcgcctcatcgcccttggcgcagcggtgcggcgtcagcgcgacggcttcgatctggcg
accgagcgcggttcggcctggcaccttgcctttcgcgtcgccgccgagcgccccgaacgt
ctggccgaggtcggccccgccaccggtcttgcccccgacaccgtggcccagatcgcggcg
caggcggcggctctgcggcactggcttctggccgaggggtttgaccggctgcatttcgaa
ctgcccttgcaggaaatcgctgccgatggctcggagatcaacgccatcgtcgatcttctg
gccgaggggccgcaggggctgttgatcgtcgatcacaaatccggcgcctgtccctacccc
gaggcgcgctttgccggctatgcctcgcagctgcaggcttatgccggtctggccgaacgc
gcctttgccaagccggtgcgggggcttgcggtgaactggatgaacgagggtgaggtctcg
gtgctcgatcttcaggaggtcccggcctga

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