Rhodobacter capsulatus: RCAP_rcc01485
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Entry
RCAP_rcc01485 CDS
T01213
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00470
D-Amino acid metabolism
rcp00550
Peptidoglycan biosynthesis
rcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCAP_rcc01485 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCAP_rcc01485 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rcp01011
]
RCAP_rcc01485 (murD)
Enzymes [BR:
rcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RCAP_rcc01485 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rcp01011
]
Precursor biosynthesis
Amino acid ligase
RCAP_rcc01485 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
IlvN
Motif
Other DBs
NCBI-ProteinID:
ADE85230
UniProt:
D5ATC3
LinkDB
All DBs
Position
1608077..1609477
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AA seq
466 aa
AA seq
DB search
MIPVQGYEGARVAVLGLGRSGLATAAALRAGGAEPVLWDDSPEARAKAEAAGYACTDLTR
AGAFEGIAALITSPGIPHLYPRPNPVIAAAMAAGVPVDNDIGLFFRSWATAGWDDFDVTP
RTVCITGSNGKSTTTALIHHILKHAGRATQMAGNIGRGVLDLDPPEDGEVVVLELSSYQT
DLARALTPDIAVFTNLSPDHMDRHSGMGGYFAAKRRLFAEGAPDRAVIGVDEPEGVYLAN
QMAMGATDDRVIRVSSAKKLGDFGWSVFARKGFLAEWRKGRQVASIDLRGVKALPGAHNH
QNACAAYAACRSLGLAPKLIEEAFHSFGGLPHRSQTIAEKRGVRYVNDSKATNVDSAAKA
LEAFSNIRWIVGGMGKEGGVSALKPLLGSVKKTYFIGHSGRDFALELAPLEHEICETMER
AVARAAEEAEPGDTVLLAPAAASFDQYPNFEKRGEHFTALAQALPD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgataccggttcagggatatgagggtgcgcgcgtcgcggtgctggggctcgggcgctcg
ggtctggccacggcggcggcattgcgggcagggggcgccgagcccgtgctttgggacgac
agccccgaggcccgcgccaaggccgaggccgcgggctacgcctgcaccgatctgacccgg
gcgggcgcctttgagggcatcgccgccctgatcacctcacccggcattccgcatctttat
ccccgccccaatccggtcatcgccgcggcgatggcggcaggcgtgccggtcgacaatgac
atcgggcttttcttccgctcctgggcgacggcgggctgggatgatttcgacgtcacgccg
cgcaccgtctgcatcaccggctcgaacggcaaatcgacgacgacggcgctgatccaccat
atcctgaaacatgcggggcgcgccacccagatggcgggcaatatcggccgcggtgtcctt
gaccttgatccgcccgaggatggcgaggtggtggtgctggaactgtcgagctaccagacc
gatctggcccgcgcgctgacccccgacatcgcggttttcaccaatctttcgcccgaccac
atggaccgccattccggcatggggggctatttcgccgccaagcgtcggctgtttgccgaa
ggcgcacccgaccgcgcggtgatcggcgtcgatgagcccgagggggtctatctggccaat
cagatggcgatgggggccacggacgatcgggtgatccgcgtctcttcggcgaagaaactg
ggcgatttcggctggtcggtctttgcgcgcaagggctttctggcggaatggcgcaagggg
cggcaggtcgcctcgatcgatctgcgcggcgtcaaggcgctgcccggggcgcataaccac
cagaacgcctgtgccgcctatgccgcctgccgcagcctcggcctggcgccgaagctgatc
gaggaggcctttcacagtttcggcgggctgccgcaccgcagccagaccatcgcggaaaag
cgcggcgtgcgctatgtgaacgacagcaaggccaccaatgtcgacagcgcggccaaggcg
ctggaggcgttttcgaacatccgctggatcgtcggcggcatgggcaaggaaggtggcgtc
agcgcgctcaagccgcttctgggctcggtgaagaagacctatttcatcggccattcgggg
cgcgatttcgcgctggaactggcgccgctcgaacacgagatctgcgagacgatggaacgc
gccgtggcccgcgccgcagaggaggcagagccgggcgataccgtgcttctggcgcccgcg
gcggcctcgttcgaccagtatccgaatttcgaaaagcgcggcgagcatttcaccgcgctg
gcgcaggcgctgcccgactga
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