Rhodobacter capsulatus: RCAP_rcc01491
Help
Entry
RCAP_rcc01491 CDS
T01213
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03420
Nucleotide excision repair
rcp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCAP_rcc01491 (uvrD)
03430 Mismatch repair
RCAP_rcc01491 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc01491 (uvrD)
Enzymes [BR:
rcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCAP_rcc01491 (uvrD)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCAP_rcc01491 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RCAP_rcc01491 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
PcrA_UvrD_tudor
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADE85236
UniProt:
D5ATC9
LinkDB
All DBs
Position
complement(1614064..1616622)
Genome browser
AA seq
852 aa
AA seq
DB search
MSSILDDDDFGGLSLSQRAMMAARGPVGTPWLDGLNDAQRRAVEALDGPVLMLAGAGTGK
TKALTARIAHLIHSGRARPNEVLAVTFTNKAAREMKDRIGRLMGQTLEGMPWLGTFHSVC
VKLLRRHAELVGLRSNFTILDTDDQIRLLKQLILAANMDEKRWPARQLAGLIDSWKNRAW
TPEHVRGADTAHFDNRGSELYAAYQDRLRTLNAVDFGDLLLHMVTIFQRHPDVLQQYQRW
FRYILVDEYQDTNTAQYLWLRLLAQGHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPG
AVVVRLEQNYRSTEHILAAASGLIAANRDRLGKTLWTADKGGEKVRLIGHWDGDEEARWI
GEEIEKLYNGSHPLAKNRRNTRSKTHEQEFERRVKNQLPPMLPEIPPDTLLSDRRIFGDI
HTRGLLLKQYGLEDRSSNVEALFQSFMLGEITILVRASHQMRAFEDRFLTIGLPYRVIGG
PRFYERQEIRDAMAYFRLAVSPDDDLAFERVVNLPKRGLGDKAQAVIQTCARQAEAGLVM
GAKAALQQGAIGGKAAGALRAFLDGIGRWHAAVLENADHVRLAETILEESGYTDMWLADK
TPEAPGRLENLKELVKALESFENLQGFLEHVALIMDNDKDQSEDKVSIMTLHAAKGLEFP
AVFLPGWEDGLFPSQRALDEGGLRALEEERRLAYVGITRAEEICTISFAGNRRVYGQWQS
QLPSRFIDELPATRVEVLTPPGLYGGGFGAATQTGFGSLEARATKADVYNSPGWKRMESR
ASTPPRPKARTVTTVDSLAFGVGDRVFHVKFGYGEVIDLEGDTALIEFDKAGSKHVKAGF
LKPAVGLDDVPF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatccttgatgatgacgatttcggcgggctgagcctgtcgcaacgcgccatg
atggcggcgcggggtccggtgggcacgccctggctcgacggtctgaacgacgcgcagcgg
cgggcggtggaggcgctggatggcccggtgctgatgctggcgggcgcgggcaccggcaag
accaaggcgctgaccgcgcgcatcgcgcatctgatccattccggccgcgcccgcccgaac
gaggttctggccgtcactttcaccaacaaggccgcgcgggaaatgaaggaccgcatcggc
cgtctgatgggccagacgctcgaaggcatgccgtggctgggcacctttcactcggtctgc
gtcaagcttctgcgccgtcacgcggaactggtcgggctgcggtcgaacttcaccattctg
gacacagacgaccagatccggttgctgaaacagctgatcctggccgcgaacatggatgaa
aagcgctggcccgcgcggcaattggccgggctgatcgacagctggaagaaccgcgcctgg
acgcccgaacatgtccgcggcgcggacaccgcgcatttcgacaaccgcggctccgagctt
tacgccgcctatcaggaccggctgcgcacgctgaacgccgtcgatttcggcgatctgctc
ttgcatatggtgacgatcttccagcgtcaccccgacgtgctgcagcagtatcagcgctgg
ttcagatatatccttgtcgacgaatatcaggacaccaacaccgcgcaatatctgtggctg
cggcttctggcacaggggcatcgcaacatctgctgcgtcggcgatgacgaccagtcgatc
tatggctggcgcggtgccgaggtgggcaatatcctgcgcttcgaaaaggattttccgggc
gccgtggtggtgcggctggaacagaactaccgctcgaccgaacatattctggccgccgcg
tccggtctgatcgccgccaaccgcgaccggctgggcaagacgctctggaccgccgacaag
ggcggcgaaaaggttcggctgatcggccattgggacggcgacgaggaagcgcgctggatc
ggcgaagagatcgagaaattatataatggttcccatccgttagcgaaaaacagaaggaac
acacggtcaaagactcacgagcaagaattcgaacggcgcgtaaaaaaccagcttcctccc
atgttgccagagattccgcctgacactttgttgtcagatcgtcgaattttcggagacatt
cacacgcgaggattgctgctcaagcaatatggattggaagatcgctcttccaatgtggaa
gctctctttcaatcgtttatgcttggtgaaatcactatccttgtccgcgccagccatcag
atgcgcgcctttgaagaccggttcctgaccatcggcctgccctatcgcgtcatcggcggc
ccgcggttctatgaacggcaggaaatccgcgatgcgatggcctatttccgcctggccgtg
tcgcccgacgatgatctggccttcgagcgggtggtgaacctgcccaaacggggtctgggc
gacaaggcgcaggcggtgattcagacctgtgcccgtcaggccgaggcgggtctggtgatg
ggcgcgaaagcggcgctgcaacagggcgcgatcggcggcaaggcggcaggggccctgcgc
gctttcctcgacggaatcgggcgctggcatgcggcggtgctggagaatgccgaccatgtg
cggctggccgaaaccattctggaggaatcgggctataccgacatgtggctggccgacaag
acgcccgaggcgccggggcggctcgaaaacctgaaggaactggtcaaggcgctggaaagc
ttcgagaatctgcagggcttcctcgaacatgtcgcgctgatcatggacaacgacaaggac
cagtccgaggacaaggtctcgatcatgaccctgcatgcggcgaaggggctggaatttccg
gccgtcttcctgcccggctgggaggacgggctgtttcccagccagcgcgctctggacgag
ggcgggctgcgcgcgctcgaggaagagcggcggctggcttatgtcggcatcacccgggcc
gaggagatttgcaccatctccttcgcgggcaaccggcgggtttacgggcaatggcagtcg
cagctgccctcgcgcttcatcgacgaattgcccgccacgcgggtcgaggtgctgaccccg
cccgggctttacggcggcggcttcggcgcggcgacgcagaccggctttggcagtctggaa
gcccgcgcgaccaaggccgatgtctacaattccccgggctggaaacggatggaaagccgc
gccagcacgccgccgcggcccaaggcgcgcacggtgacgacggtggacagcctcgccttt
ggcgtgggcgaccgggtgttccacgtcaaattcggctatggcgaggtgatcgatctggaa
ggcgataccgccttgatcgaattcgacaaggccgggtcgaaacatgtcaaggccgggttc
ctgaaacccgccgtcgggctggacgacgtgccgttctga
DBGET
integrated database retrieval system
