KEGG   Rhodobacter capsulatus: RCAP_rcc01556
Entry
RCAP_rcc01556     CDS       T01213                                 
Symbol
lpdA2
Name
(GenBank) dihydrolipoyl dehydrogenase-2
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rcp  Rhodobacter capsulatus
Pathway
rcp00010  Glycolysis / Gluconeogenesis
rcp00020  Citrate cycle (TCA cycle)
rcp00260  Glycine, serine and threonine metabolism
rcp00280  Valine, leucine and isoleucine degradation
rcp00310  Lysine degradation
rcp00380  Tryptophan metabolism
rcp00620  Pyruvate metabolism
rcp00630  Glyoxylate and dicarboxylate metabolism
rcp00640  Propanoate metabolism
rcp00670  One carbon pool by folate
rcp00785  Lipoic acid metabolism
rcp01100  Metabolic pathways
rcp01110  Biosynthesis of secondary metabolites
rcp01120  Microbial metabolism in diverse environments
rcp01200  Carbon metabolism
rcp01210  2-Oxocarboxylic acid metabolism
rcp01240  Biosynthesis of cofactors
Module
rcp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rcp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rcp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rcp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RCAP_rcc01556 (lpdA2)
   00020 Citrate cycle (TCA cycle)
    RCAP_rcc01556 (lpdA2)
   00620 Pyruvate metabolism
    RCAP_rcc01556 (lpdA2)
   00630 Glyoxylate and dicarboxylate metabolism
    RCAP_rcc01556 (lpdA2)
   00640 Propanoate metabolism
    RCAP_rcc01556 (lpdA2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RCAP_rcc01556 (lpdA2)
   00280 Valine, leucine and isoleucine degradation
    RCAP_rcc01556 (lpdA2)
   00310 Lysine degradation
    RCAP_rcc01556 (lpdA2)
   00380 Tryptophan metabolism
    RCAP_rcc01556 (lpdA2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RCAP_rcc01556 (lpdA2)
   00670 One carbon pool by folate
    RCAP_rcc01556 (lpdA2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcp04147]
    RCAP_rcc01556 (lpdA2)
Enzymes [BR:rcp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RCAP_rcc01556 (lpdA2)
Exosome [BR:rcp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RCAP_rcc01556 (lpdA2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 DAO GIDA HI0933_like FAD_oxidored FAD_binding_3 Lys_Orn_oxgnase AlaDh_PNT_C 2-Hacid_dh_C Thi4 3HCDH_N
Other DBs
NCBI-ProteinID: ADE85301
UniProt: D5ATL2
LinkDB
Position
1686269..1687663
AA seq 464 aa
MAAKSFDMIVIGAGPGGYVAAIRGAQLGLSVAVVEREHLGGICLNWGCIPTKALLRSAEV
FHLMHRAKEFGLKAEGLGYDLDAVVARSRAVAKQLSGGIGHLLKKNKVTVLMGEATLPRP
GVVAVKTGAGTEEITAKNIILATGARARVLPGLEADGDLVWTYKHALTPKRMPKKLLVIG
SGAIGIEFASFFNTLGADTTVVEVMDRVLPVEDAEISAFAKKQFVKQGMKILEKTTVVKL
DRSPGKVVAHLQDAKGTVTADFDTVISAVGIVGNVEGLGLEALGVKIDRTHVVVDEFCRT
GVPGLYAIGDIAGAPWLAHKASHEGVMVAELIAGKHAHPIKPGTIAGCTYCTPQVASVGL
TEEKAKAAGHEVRVGRFPFIGNGKAIALGEPEGMVKTVFDAKTGELLGAHMVGAEVTELI
QGYVIGRTLETTEEDLMHTVFPHPTLSEMMHEAVLDAYGRALHM
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggccgccaagagcttcgacatgatcgtgatcggtgcgggaccggggggctatgtcgcg
gcgatccgcggcgcgcagttggggctttcggtggccgtggtcgagcgcgagcatctgggc
ggcatctgtctgaactggggctgcatcccgacgaaggcgcttttgcgctcggccgaggtg
tttcacctgatgcaccgcgccaaggaattcgggctgaaggccgaggggctgggctatgat
cttgatgcggtggtggcgcggtcgcgcgcggtggccaagcagctgtcgggcggcatcggg
catttgctgaagaagaacaaggtcaccgtgctgatgggcgaggccacgctgccgcgcccg
ggtgtggtggcggtgaaaaccggcgcgggcaccgaggagatcacggcgaagaacatcatc
ctggccaccggtgcgcgggcgcgggtgctgccggggctcgaggccgatggcgatctggtc
tggacctacaagcatgcgctgacgccgaaacggatgccgaagaagctgctggtcatcggc
tcgggcgcgatcgggatcgaatttgcctccttcttcaacaccttgggcgccgatacgacg
gtggtcgaggtgatggaccgggttctgccggtggaggatgccgagatttcggcctttgcg
aagaagcaattcgtcaagcaggggatgaagattctcgaaaagacgacggttgtgaagctg
gaccgcagcccgggcaaggtcgtcgcgcatctgcaggacgccaagggcacggtcaccgcg
gacttcgacacggtgatttcggcggtggggattgtcggcaatgtcgaggggctggggctg
gaagctttgggcgtgaagatcgaccggacgcatgtggtggtggatgagttctgccgcacc
ggcgttccggggctttacgccatcggcgacatcgccggggcgccgtggctggcgcacaag
gccagccatgaaggcgtgatggtggcggaactgatcgcgggcaagcacgcccatccgatc
aagccgggcacgattgccggctgcacctattgcacgccgcaggtcgcctcggtcgggctg
accgaggaaaaggcgaaagccgcgggccatgaggtgcgggtcggccgcttccccttcatc
ggcaacggcaaggcgattgcgcttggcgagcccgaggggatggtgaagaccgttttcgac
gcgaagaccggcgagttgctcggcgcgcatatggtcggcgccgaggtgaccgagctgatc
cagggctatgtgatcggccgcacgctggaaaccacggaagaagatctgatgcacaccgtc
ttcccgcatccgacgctgagcgagatgatgcatgaagcggtgctcgacgcctatggccgc
gcgctgcacatgtga

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