Entry |
|
Symbol |
uvrA
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Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
rcp Rhodobacter capsulatus
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rcp00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCAP_rcc01558 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rcp03400]
RCAP_rcc01558 (uvrA)
DNA repair and recombination proteins [BR:rcp03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCAP_rcc01558 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCAP_rcc01558 (uvrA)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
1688414..1691287
|
AA seq |
957 aa
MAEQKFIEVRGAREHNLKGVDLDIPRDALTVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDQMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGT
PYSPATGLPIEAMQVQDMVDRVMAMEEGARGYLLAPVIRDRKGEYRKEFAEWRKAGFQRV
KVNGAFYDLEEPPVLDKKFRHNIDVVVDRIVVRPGLETRLADSFRTALDLADGIALWEDA
LSTEETEAGKEAQRITFSEKFACPVSGFTIAEIEPRLFSFNAPFGACPVCDGLGVELFFD
DRLVVPDTSLTLAAGALAPWAKSKSPYFIQTIDALSKHYGFDKKKPWKSLPPEVQRLFLY
GSGKDEIKFRFDEGGRVYEVTRSFEGVIPNMERRYRETDSAWVREEFERYQNNRPCGACG
GYRLKPEALAVKIAGLHIGQIVEMSIKEAFAKIEDIPVQLSKQKNEIARPILKEIRERLG
FLINVGLDYLTLSRAAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLL
STLKNLRDQGNTVLVVEHDEDAIRHADYVFDIGPGAGVHGGQVVAQGTPAEIAADPASLT
GQYLAGTRRIEVPVQRREGNGKKLVISKACGNNLKDVTAAFPLGKFVCVTGVSGGGKSTL
TIETLYKTAAMRLNGARETPAPCDSIKGFEHLDKVIDIDQRPIGRTPRSNPATYTGAFTP
IRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGHR
YNRETLEIKFKDKSIADVLEMTVEDAQEFFKAVPSIREKMDALVEVGLGYIKVGQQATTL
SGGEAQRVKLSKELARRATGRTLYILDEPTTGLHFEDVRKLLEVLHSLVDQGNTVVVIEH
NLDVIKTADWIIDIGPEGGDGGGRIVAEGTPEQVAAHPASHTGRYLAPMLGMKVAAE |
NT seq |
2874 nt +upstreamnt +downstreamnt
atggccgagcaaaagttcatcgaagtgcgcggggcgcgcgagcataacctcaagggcgtc
gatctcgacattccgcgcgatgcgctgacggtgatcaccgggctttccggctcgggcaag
tcctcgctcgcctttgacacgatctatgccgaggggcagcgccgctatgtcgaaagcctc
tcggcctatgcgcggcagtttctggaccagatgggcaagcccgatgtcgatcacatctcg
gggctgagccccgcgatttcgatcgagcagaagacgacctcgaagaacccgcgctcgacc
gtcggcacggtgaccgagatttacgactatctgcggctgctctttgcccgcgcgggcacg
ccctattcgcccgccaccggcctgccgatcgaggcgatgcaggtgcaggacatggtcgat
cgcgtcatggcgatggaggagggggcgcggggctatctgctggcccccgtcatccgcgac
cgcaagggcgaatatcgcaaggaattcgccgaatggcgcaaggcgggctttcagcgggtg
aaggtgaacggggcgttttacgacctcgaggagccgcccgtgctggacaagaaattccgt
cacaacatcgatgtggtggtggatcggatcgtcgtgcggccggggctggagacgcggctg
gcggacagtttccgcaccgcgctcgatctggccgacggcatcgcgctgtgggaagacgct
ctgtcaaccgaggagaccgaggcgggcaaggaagcgcagcgcatcacgttctcggagaaa
ttcgcctgtccggtcagtggcttcaccattgcggaaatcgagccgcggctgttttccttc
aacgcgccctttggcgcctgcccggtttgcgacgggctgggggtggagctgttcttcgat
gaccggctggtggtgcccgacacatccctgacgctggccgccggggcgctggccccctgg
gcgaagtcgaaaagcccctatttcatccagaccatcgacgcgctttcgaaacattacggc
tttgacaagaagaagccgtggaaatcgctgccgcccgaggtgcagcggctgttcctttat
ggctccggcaaggacgagatcaagttccgctttgacgagggcggccgggtctatgaggtg
acgcgcagtttcgaaggcgtgatcccgaacatggagcgacgctatcgcgagaccgacagc
gcctgggtgcgcgaggaattcgagcgctatcagaacaaccgcccctgcggcgcctgcggc
ggctaccggctgaaacccgaggcgctggcggtgaagatcgccgggctgcacatcggccag
atcgtcgaaatgtcgatcaaggaggccttcgcgaagatcgaggacatccccgtccagctg
agcaagcaaaagaacgagatcgcccgcccgatcctcaaggaaatccgcgagcggctgggc
tttctgatcaatgtcgggctggattatctgaccctgagccgggcggcggggacgctttcg
ggcggcgaaagccagcgcatccggctggcgagccagatcggctccggcctgaccggggtg
ctttacgtgctcgacgaaccgagcatcgggctgcatcagcgcgacaatgaccggctgctt
tcgacgctgaaaaacctgcgcgatcaaggcaatacggtgctggtggtcgaacatgacgaa
gatgcgatccgccatgccgattatgtcttcgacatcggcccgggcgcgggggtgcatggc
gggcaggtggtggcgcagggcacgcccgccgagattgccgccgatccggccagcctgacc
gggcaatatctggcgggcacgcggcgcatcgaagtgcccgtgcaacggcgcgaggggaat
ggcaagaagcttgtgatttcaaaggcctgcggcaacaacctgaaagatgtgacggctgcg
tttccgctgggcaaattcgtctgcgtgaccggcgtctcgggcggcggcaaatccacgctg
accatcgagacgctttacaagaccgcggcgatgcggctgaacggcgcgcgggaaacgcct
gcgccttgcgacagcatcaagggcttcgagcatctcgacaaggtgatcgacatcgaccag
cggccgatcgggcgcacgccgcgctcgaaccccgcgacctataccggcgcctttaccccc
atccgcgactggttcgcgggcctgcccgaggcgcaggcgcgcggctacaagcccgggcgg
ttcagcttcaacgtcaagggcgggcgctgcgaggcctgtcagggcgatggcgtgatcaag
atcgagatgcacttcctgcccgacgtgtacgtcacctgcgagacctgcaagggccaccgc
tacaaccgcgagactttggagatcaagttcaaggacaagagcatcgccgatgtccttgaa
atgacggtggaagatgcgcaggaattcttcaaggccgtgccctcgatccgggaaaagatg
gatgctttggtcgaggtggggctgggctatatcaaggtcgggcagcaggcgacgacgctt
tcgggcggcgaggcgcagcgggtgaagctgtcaaaggaactggcgcgccgcgccaccggg
cggacgctttacatcctcgatgaacccacgacggggctgcatttcgaggatgttcgcaaa
cttctggaagttctgcattctctggtcgatcagggcaacacggtcgtggtgatcgagcac
aatcttgacgtgatcaagaccgccgactggatcatcgacatcggtcccgagggcggcgat
ggcggcgggcggatcgtggccgagggcacgccggaacaggtggcggcccatccggccagc
cataccgggcgctatctggcgccgatgctggggatgaaggtggcggcggaatga |