Rhodobacter capsulatus: RCAP_rcc01661
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Entry
RCAP_rcc01661 CDS
T01213
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RCAP_rcc01661 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcp03016
]
RCAP_rcc01661 (trmU)
Enzymes [BR:
rcp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
RCAP_rcc01661 (trmU)
Transfer RNA biogenesis [BR:
rcp03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RCAP_rcc01661 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
DUF7411
QueC
Arginosuc_synth
NAD_synthase
ThiI
Motif
Other DBs
NCBI-ProteinID:
ADE85406
UniProt:
D5ATW7
LinkDB
All DBs
Position
complement(1799204..1800268)
Genome browser
AA seq
354 aa
AA seq
DB search
MSGGVDSSVVAAMLKEEGYDVIGVTLQLYDHGAALAKKGACCAGQDIHDARRVAEAMNFP
HYVLDYENTFREAVIEEFADAYLAGATPVPCIRCNERVKFKDLLETARDLDADCMATGHY
IQRKLGAHGPELHSAADPMRDQSYFLFSTTPEQLAFLRFPLGHLPSKAETRKLAARFGLI
VADKPDSQDICFVPTELCERHRKLRPGAADPGEIVDLAGKVLGHHKGVIHYTIGQRRGLG
IGGLGDHPLYVVKLDPDTRRVIVGPKEALATRLLRVAEINWLGDEPFESHPEREVSVRIR
STRAPRPAILRPLSATTAEVELIEPEEGVSPGQACVFYETEGSRIFGGGWIVTA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcgtcgacagctcggtggtggccgccatgctgaaggaggaaggttacgat
gtcatcggcgtgaccttgcagctttatgaccatggcgcggccctggcgaaaaagggcgcc
tgctgcgcgggccaggacatccacgatgcccgccgcgtcgcggaagcgatgaatttcccc
cactatgtccttgattacgaaaacactttccgcgaagccgtgatcgaggaattcgccgat
gcctatctcgccggggcgacgcccgtaccctgcatccgctgcaatgaacgggtgaagttc
aaggatctgctggaaaccgcccgcgatctcgacgccgattgcatggcgaccggccactac
atccagcgcaagctgggcgcccacgggcccgagctgcattcggccgccgatccgatgcgc
gaccagagctatttcctgttctcgaccacgcccgagcagcttgccttcctgcgattcccg
ctgggccacctgccctcgaaggcggagacccgcaaactggccgccagattcggtctgatc
gtcgccgacaagcccgacagccaggatatctgcttcgtgccgacggaattatgcgagcgt
catcgaaagctgcgccccggcgccgccgatccgggcgagatcgtcgatcttgcgggcaaa
gtgctgggccatcacaagggcgtgatccactacacgatcgggcagcgccgcggcctgggc
atcgggggcctcggcgatcatccgctttacgtggtgaagcttgatcccgacacgcgccgg
gtgatcgtcggcccgaaagaggcgcttgccacgcggcttttgcgggtggccgaaatcaac
tggctgggcgacgagccgttcgaaagccacccggaacgggaggtctcggtgcggatccgc
tccacccgggcgccgcgtccggcgatcttgcggccgctctcggccaccacggccgaggtc
gagctgatcgagcccgaagaaggcgtcagcccgggtcaggcctgcgtcttttacgaaacc
gaaggcagccggatcttcggcggcggctggatcgtcacggcgtag
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