Rhodobacter capsulatus: RCAP_rcc02133
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Entry
RCAP_rcc02133 CDS
T01213
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc02133 (sbcD)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RCAP_rcc02133 (sbcD)
Archaeal homologous recombinant proteins
RCAP_rcc02133 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADE85863
UniProt:
O68033
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All DBs
Position
2296364..2297581
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AA seq
405 aa
AA seq
DB search
MRILHTADWHIGQTLNGWSREAEHRAFLADLGEILLAEQVDALLVAGDVFDGLNPSGEAQ
RLLYAALAGYVRANPRLQIVLTSGNHDPAQRLEAPEAVLRELGVHVLGTLSRGPGGMDLD
RHLIPLRDRAGQIRAQVLALPFLRQADLPGLRLGAEEGTEGAVTAALRALLAETVARAAA
IAGTLPLIAMAHLTCAGGLESAGAERRILIGGDHAVPPDVFPPALAHVALGHLHRPQSLD
GGRVRYSGAPFPLSASEIGYDHGVTLLDLAGGAAPRHIPLPRPVPMLRLPAQGTAPLPEI
LAALDRLALPDRPRAEGPFLYLALRADRPVTEITAALDAALEALPLRLAGLTITRPETAR
PAAAPPQDLTRTTPEALFAAAFRDLHGTEPETRHLSAFRDALSEV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgcacaccgccgactggcatatcggacagaccctgaacggctggtcgcgc
gaggccgagcaccgcgccttcctggccgatctgggcgaaatcctgctggcggaacaggtg
gatgcgctgctggtggcgggggatgtgtttgacgggctcaacccctcgggcgaggcgcag
cggctgctttacgcggcgctggcgggctatgtccgggccaatccgcggctgcagatcgtg
ctgacatcgggcaatcacgacccggcgcagcggctggaagcccccgaggcggtgctgcgc
gagctgggcgtgcatgtccttggcacgctgagccgcggccccggggggatggatcttgac
cgccatctgatcccgctgcgcgaccgggccgggcagatccgcgcgcaggttctggcgctg
cccttcctgcgtcaggccgatctgccggggctgcgcctgggcgccgaggaggggaccgag
ggcgccgtcaccgccgcgctgcgggcgctgctggccgagacggtcgcgcgcgccgcagcg
atcgcgggcacgctgccgctgatcgcgatggcgcatctgacctgcgcgggcgggctggaa
agcgcgggcgccgagcggcgcatcctgatcggcggcgatcatgccgtgccccccgatgtc
tttccccccgcgctggcccatgtcgcgctcggtcacctgcacaggccgcaatcgctcgac
ggcgggcgggtgcgctattccggcgcgccctttccgctttcggccagcgagatcggctat
gaccacggcgtcacgctgcttgatctggcaggcggcgccgcgccgcgccatatcccgctg
ccgcgtccggtgccgatgctgcgcctgcccgcgcagggaaccgcccccctgcccgagatc
ctcgccgcgctcgaccggctcgccctgcccgaccgcccccgcgccgagggccccttcctc
tatctcgcgctgcgggccgaccgcccggtgaccgagatcaccgcggcccttgatgccgcg
ctcgaggcgttgcccctgcggctggccgggctgacgatcacccgccccgaaaccgcccgc
cccgcggccgccccgccgcaggatctgacccggaccacgcccgaggcgctgtttgccgcg
gcctttcgcgatctgcacggcaccgagcccgagacccgccatctgagcgccttccgcgac
gcgctgtccgaggtctga
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