Rhodobacter capsulatus: RCAP_rcc02134
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Entry
RCAP_rcc02134 CDS
T01213
Symbol
sbcC
Name
(GenBank) exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc02134 (sbcC)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RCAP_rcc02134 (sbcC)
Archaeal homologous recombinant proteins
RCAP_rcc02134 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADE85864
UniProt:
O68032
LinkDB
All DBs
Position
2297586..2301302
Genome browser
AA seq
1238 aa
AA seq
DB search
MRILSISGQNIASLAAPFRIDFTTAPLAGAGLFAITGETGAGKSSILDAMCLALYGDAPR
LSAGARSDKVPDAAGEEISAADSRAILRRGAATGWAEVRFAGRDGLEYIARWQARRARDK
VEGKLQTVARSLARAEDGQVLAAQTQAVSEQVAALTGLSYEEFRRTVLLAQGDFDAFLRA
DTGERATLLEKVTGTGLYRAVSIRVYERTEMARAEHAQLLARAAEHRLLDDAARAALTEE
IAARTAATAAATAERAGLSEALARHRRHAEAVRQVQAAAAALAGAEALQAEAGPARAQLD
RLERAAPLHLPWQAAAEARARLDAARSGAEAAAASRSLAAQALATRADAAARATAAGTET
EEAFKAFGRIWDRAAALDAQIATAATEAEAARTRAAETARAAAGIRRAEADLAAAETRAQ
QARQAAEARLAELAAQAPLADDWPQLRRDLADHRAACAAQAAAATAAQAAQDRAQALAQE
ARAAAAAEARDQAADSALAKAAAALQQALAPLEAAHPPARTADLARIETDLAELTRALRD
GAEAAALGAAAQRAATAAATEAALARAQESAAKQDLDRAETQIAALTAPLEQADLALSDA
ARSLRAQLSAGSPCPVCGALEHPTPAEAGLAHLAERLRADQAAARGAAQAARDALTAAQG
ARATAEARGTQAAEDQRRAQTRAEAARAAWGDTQPRVSARPLAPALPGTPDPTALAAAQD
RLCALQTAEAAAQAEISALRTRLTEAERDRERLRRALLAHRGTRERLAVQQAETAQEAAL
AEARRTEAAARRDGLALALAPALARAGEDDPAAPGLAERLAATVSAVGAARTGLQAAQEA
LSALAPQLAAARRDSETATAQAQSAAQAARDRDGAWAALRAERAPLLDGQPTALHRSRFN
DQRLAAQRAQQAAAADLATAQAALAAAEARAAETARAASEAATAQRAAEADLAAALEAAA
MSAAELAALIALPPGTAERLRADLRGRDDAVTAARSALGARKTDLQEIEDQGNPAEDPEA
LSARLAALEAEAERRAQEIGQLSAELARDAATRAALAGLAVETEAARAELEVWEAVNKAI
GARSGDRFARIAQAITLDVLVEHANRHLADLNPRYRLRRAAELSLQVEDRDMGDTARATR
SLSGGERFLVSLALALALSQMGGKGTFAGTLFIDEGFGALDAGSLDLAIDALETLQSQGR
QVGVISHVEAMQARIATRIAVRKEGGGRSSLRVEGPGV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgtcgatttccgggcagaacatcgccagcctcgcggcgcccttccgcatc
gatttcaccaccgcgccgctggcgggcgcggggcttttcgcgatcaccggggaaaccggg
gcgggcaaatcctcgatcctcgatgcaatgtgcctcgcgctttacggcgatgcgccgcgg
ctttcggcgggggcgcggtccgacaaggtgcccgatgccgcgggcgaggagatcagcgcc
gccgacagccgcgcgatcttgcggcggggcgcggcgacgggctgggccgaggtgcggttc
gccggccgcgacgggctcgagtatatcgcgcgctggcaggcgcggcgggcccgcgacaag
gtcgagggcaagctgcaaacggtggcgcgcagcctggcccgggccgaggacgggcaggtt
ctggcggcgcagacccaggcggtcagcgaacaggtcgcggcgctgaccggcctgtcctac
gaggaattccgccgcaccgtccttctggcgcagggcgatttcgacgccttcttgcgcgcc
gacaccggggaacgcgcgacgcttctggaaaaggtcaccggaacagggctttaccgggcg
gtctcgatccgggtctatgaacgcaccgagatggcccgggcggaacatgcgcagcttctg
gcccgcgcggccgagcatcggctgctggacgacgcggcccgcgcggcgctgaccgaagag
atcgccgcccggaccgcggcgacggcggcggcaacggcggaacgggccgggctgagcgag
gcgctggcgcggcaccgccgccatgcagaggcggtccggcaggtgcaggccgccgccgcc
gcgctggccggggccgaggcgctccaggccgaagcgggtccggcccgagcgcagcttgac
cggctggagcgggcggcgccgctgcatctgccctggcaagccgccgccgaggcccgcgcc
cgtctggacgcggcccgaagcggcgccgaagcggccgcggcttcccgcagcctggcagcg
caggcgcttgcgacacgcgcagatgccgccgcccgggcgacggcggcggggacggaaacg
gaagaggccttcaaggccttcggccggatctgggaccgcgccgccgcgctggatgcgcag
atcgcgactgcggcgaccgaggcggaagccgcccggacccgcgccgccgagaccgcgcgc
gccgccgccgggatccgccgtgccgaagccgatctggccgcggccgagacccgagcgcag
caggcgcgtcaggccgccgaggcgcggctggcagagcttgccgcgcaggcgccgcttgcc
gatgactggccgcagctgcgccgcgatctggccgatcatcgcgcggcctgcgcggcgcaa
gccgcggccgcgaccgcggcacaggcggcgcaggaccgggcgcaggcgctggcgcaggag
gcccgcgcagccgccgcggccgaggcccgtgatcaggccgccgacagcgccctggcgaaa
gcggcggcggcgctgcagcaggcgcttgcgccgcttgaagccgcgcatccccccgcccgg
accgccgatctggcgcggatcgaaaccgatctggccgagctgacccgggcgctgcgcgat
ggcgccgaagccgcggctctgggcgcggcggcgcagcgggcggccaccgcggccgccacg
gaggccgccttggcacgggcgcaggaaagcgctgccaaacaagaccttgaccgcgccgag
acgcagatcgccgcgctgacggcgccgcttgaacaggccgatctggcgctttccgacgcc
gcccgcagcctgcgggcgcagctgagcgcgggcagcccctgcccggtctgcggcgcgctt
gagcatccgaccccggccgaggcggggctggcgcatctggccgagcggctgcgcgccgat
caagccgccgcccgcggcgcggcacaggcggcgcgcgacgcgctgaccgccgcgcagggc
gcccgcgcgacggccgaggcccgcggcacacaggcggccgaggatcagcgccgcgcccaa
acccgcgccgaagccgcccgcgcggcctggggcgacacacagccgcgcgtctcggcccgg
ccgctggcccccgcgctgcccgggaccccggacccgaccgcccttgccgcggcgcaggac
cggctttgcgccctgcaaaccgccgaagccgccgctcaggccgagatttcggcgctgcgc
acccgcctgaccgaggccgagcgcgaccgcgagcgcctgcgccgcgcgcttttggcgcat
cgcggcacgcgcgagcggctggccgtgcagcaggccgaaaccgcgcaggaggcagccctg
gccgaggcccgccggaccgaggccgcggcccggcgcgacgggctggcgctggcgctggcc
ccggcgctggcacgggcgggcgaagacgacccggccgcgcccgggctggccgaacggctt
gccgcgacggtctcggcggtcggggcggcgcggacggggctgcaggcggcgcaggaggcg
ctgagcgcgctggccccgcaactggccgcggcgcgacgggacagcgagacggcgacggcg
caggcccaaagcgcggcgcaggcggcgcgggaccgggacggcgcatgggcggcgctgcgc
gccgaacgggcgccgcttctggacgggcagcccaccgccctgcatcgcagccgcttcaac
gaccagcggctggcggcgcaacgggcgcaacaggccgccgccgccgatctggccacggcg
caggcggcgctggccgcggccgaagcccgcgcggcggaaaccgcccgcgcggcctccgag
gccgccaccgcgcagcgcgcggccgaagccgaccttgccgccgcgctggaggccgccgcg
atgagcgcggcagagcttgcggcgctcatcgccctgccgcccggcacggccgagcgcctg
cgggccgatctgcgcgggcgtgacgatgcggtgacggcggcgcgctcggcccttggcgcg
cgcaagaccgacctgcaagagattgaggatcaaggaaatcccgccgaagaccccgaagcg
ctttcggcccgtcttgcggcgctcgaggccgaggccgagcgccgcgcgcaagagatcggg
cagctctcggccgagcttgcgcgcgatgcggcgacgcgggcggcgctggccggtctggct
gtggaaaccgaagccgcgcgggccgagctggaggtctgggaggcggtgaacaaggcgatc
ggcgcgcgctcgggcgaccgctttgcgcggatcgcgcaggcgatcacgctcgatgtgctg
gtcgaacatgccaaccgccatctggccgatctgaacccgcgctaccggctgcgccgcgcc
gccgaactgagcctgcaagtcgaggaccgcgacatgggcgacaccgcccgcgccacccgc
agcctctcgggcggggagcgatttctggtctcgctggcgctggcgctggcactctcgcag
atgggcggcaagggcactttcgcgggcacccttttcatcgacgagggctttggcgcgctg
gatgcgggcagccttgatctggcgatcgacgcgctcgagacgctgcaatcgcaggggcgg
caggtcggggtgatcagccatgtcgaggcgatgcaggcccgcatcgccacccgcatcgcc
gtgcgcaaggagggcggcggccggtcgagcctgcgcgtcgaagggcccggggtctga
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