Rhodobacter capsulatus: RCAP_rcc02958
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Entry
RCAP_rcc02958 CDS
T01213
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc02958 (phrB)
Enzymes [BR:
rcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RCAP_rcc02958 (phrB)
DNA repair and recombination proteins [BR:
rcp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RCAP_rcc02958 (phrB)
Prokaryotic type
RCAP_rcc02958 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADE86685
UniProt:
D5APW6
LinkDB
All DBs
Position
complement(3147484..3148935)
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AA seq
483 aa
AA seq
DB search
MRDETPILLWLRRDFRLSDHPMLSAAAASGRPVLALFILDPLAEAYGAAPKWRLEQALAA
FAPALAACGVPLVLRRGPALAVLRQVLAESGAGAVWWSRDLDPAAIARDTEVKTALRAEG
LEARSFDGQLLFAPWAVQTGQGGPYRVYTPYWRAVRGLTVAPPLAPVTALRPGPVLRGES
LDALGLGRAMRRGGAVVAKYARVGEAAAQARLERFLREGIETYQARRDFLAENATSELSE
HLAWGEISPRVIWHAGAQAMAEGRAGAETFLKELVWREFAWHLMFYYPRLATENWRPDWD
SFPWAGESAAAERWRRGQTGEPIVDAAMREMYVTGRMHNRARMIVASYLTKHLLTDWRIG
LAWFEDCLIDHDPAANAMGWQWVAGCGPDAAPYFRIFNPASQAEKFDPEGRYRRAWLAEG
NRHAPQTAQDFFAAVPRSWGLVPGAALSAPLIDLAAGRDRALAAYAARPKTGQTGTGAAT
IAS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatgaaaccccgatcctgctctggttgcgccgcgatttccggctgagcgaccat
ccgatgctctctgccgccgctgcctcggggcggccggtgctggcgcttttcatccttgac
ccgctggccgaggcctatggcgcggcgccgaaatggcggctggaacaggcgcttgcggcc
tttgccccggcgctggcggcctgcggcgtgccgcttgtgctgcgccgcggcccggcgctt
gcggtgctgcggcaggttctggccgaaagcggcgcgggggcggtctggtggagccgcgat
ctggacccggcggcgattgcgcgcgacaccgaggtgaagaccgcgctgcgcgccgagggg
cttgaggcgcggtccttcgacgggcagctgctgtttgcgccctgggcggtgcagaccggg
cagggcggtccctatcgcgtctacacgccctactggcgcgcggtgcggggcctgacggtg
gcgccgccgctggcccccgtcaccgcgctgcgccccgggccggtcctgcgcggcgaaagc
ctggacgcgctgggacttggccgggcgatgcggcgcggcggcgcggtcgtggcgaaatac
gcccgggtgggcgaagcggcggcacaggcccggctggagcggttcctgcgcgagggcatc
gagacctatcaggcacggcgggattttctggccgagaacgccacgtccgaactgtcggaa
cacctggcctggggcgagatttcgccgcgggtgatctggcacgccggggcgcaggcgatg
gcggagggccgggcgggggccgagaccttcctcaaggaactggtctggcgcgaatttgcc
tggcatctgatgttctactacccgcggcttgccacggagaactggcggccggactgggac
agcttcccctgggcgggcgagagtgccgcggccgagcgctggcggcgcggccagaccggc
gagccgatcgtcgatgccgcgatgcgggaaatgtatgtgaccgggcggatgcacaaccgg
gcgcggatgatcgtcgcctcgtatctgaccaagcatctgctgaccgattggcgcatcggg
ctcgcgtggttcgaggactgcctgatcgatcacgacccggcggcgaatgcgatgggctgg
caatgggtggcgggctgcgggccggatgcggcgccctatttccgcatcttcaacccggcc
agccaggccgagaaattcgaccccgagggccgctaccgccgcgcctggctggccgagggc
aaccgccatgcgccgcagaccgcgcaggatttctttgccgccgtgccgcggtcctggggg
cttgtgccgggggcggccctctcggcgccgctgatcgatctggccgcggggcgggaccgg
gcgctggccgcctatgcggcgcggccgaagacgggccagaccggcaccggcgctgccacg
attgcatcctga
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