Rhodobacter capsulatus: RCAP_rcc03035
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Entry
RCAP_rcc03035 CDS
T01213
Symbol
fdhA
Name
(GenBank) NAD-dependent formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00630
Glyoxylate and dicarboxylate metabolism
rcp00680
Methane metabolism
rcp01100
Metabolic pathways
rcp01120
Microbial metabolism in diverse environments
rcp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCAP_rcc03035 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
RCAP_rcc03035 (fdhA)
Enzymes [BR:
rcp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RCAP_rcc03035 (fdhA)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_10
Fer4
Fer4_6
Fer4_2
Fer4_21
Fer4_9
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ADE86759
UniProt:
D5AQH0
Structure
PDB
LinkDB
All DBs
Position
complement(3224316..3227192)
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AA seq
958 aa
AA seq
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MKDLIIPPLDWTQDMGTPKREGAPVHLTIDGVEVTVPAGTSVLRAAAEAGISIPKLCATD
NVEPVGSCRLCMVEIEGMRGTPTSCTTPVAPGMRVHTQTPQLQKLRRGVMELYISDHPLD
CLTCAANGDCELQDMAGAVGLREVRYQAKDTHFARRDATGPNPRYIPKDNSNPYFSYDPA
KCIVCMRCVRACEEVQGTFALTVMGRGFDARISPAAPDFLSSDCVSCGACVQACPTATLV
EKSVERIGTPERKVVTTCAYCGVGCSFEAHMLGDQLVRMVPWKGGAANRGHSCVKGRFAY
GYATHQDRILKPMIRDKITDPWREVNWTEALDFTATRLRALRDSHGADALGVITSSRCTN
EETYLVQKLARAVFGTNNTDTCARVCHSPTGYGLKQTFGTSAGTQDFDSVEETDLALVIG
ANPTDGHPVFASRLRKRLRAGAKLIVVDPRRIDLLNTPHRGEAWHLQLKPGTNVAVMTAM
AHVIVTEQIFDKRFIGDRCDWDEWADYAEFVANPEYAPEAVESLTGVPAGLLRQAARAYA
AAPNAAIYYGLGVTEHSQGSTTVIAIANLAMMTGNIGRPGVGVNPLRGQNNVQGSCDMGS
FPHEFPGYRHVSDDATRGLFERTWGVTLSSEPGLRIPNMLDAAVEGRFKALYVQGEDILQ
SDPDTRHVSAGLAAMDLVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRR
VMAPKAGFADWEVTQMLANALGAGWHYTHPSEIMAEIAATTPGFAAVTYEMLDARGSVQW
PCNEKAPEGSPIMHVEGFVRGKGRFIRTAYLPTDEKTGPRFPLLLTTGRILSQYNVGAQT
RRTENTVWHGEDRLEIHPTDAETRGIRDGDWVRLASRAGETTLRATVTDRVSPGVVYTTF
HHPDTQANVVTTDTSDWATNCPEYKVTAVQVAASNGPSDWQQDYAAQAAAARRIEAAE
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgatcattcccccgctggattggacgcaggacatgggcacgccgaaacgc
gagggcgcgccggtgcatctgaccatcgacggcgtcgaggtcaccgtgcccgcgggcacc
tcggtgctgcgcgccgcggccgaggccgggatttccattccgaaactttgcgccactgac
aatgtggagccggtggggtcgtgccgtctgtgcatggtggaaatcgaggggatgcggggc
acgccgacctcctgcaccaccccggttgcgcccgggatgcgggtgcatacgcagacgccg
cagctgcagaaactgcgccgcggcgtgatggagctttatatctcggaccatccgctcgat
tgcctgacctgcgcggcgaatggcgattgcgaattgcaggacatggcgggcgccgtcggc
ctgcgcgaggtccgctatcaggcgaaggacacccatttcgcgcgccgcgatgccacgggg
ccgaacccgcgttacatccccaaggacaattccaacccctatttcagctatgatccggcg
aaatgcatcgtctgcatgcgctgtgtgcgcgcctgcgaggaagtgcagggcactttcgcg
ctgacggtgatggggcgcggctttgacgcccggatctcgcccgcggcgcccgatttcctg
tcctcggattgcgtgtcctgcggcgcctgcgtgcaggcctgcccgacggcgaccttggtc
gaaaagtcggtcgaaaggatcggcacgccggaacgcaaggtggtcaccacctgcgcctat
tgcggcgtcggttgcagcttcgaggcgcatatgctgggcgatcagctggtgcgcatggtg
ccctggaaaggcggcgcggcgaaccggggccacagctgcgtcaagggccgcttcgcttac
ggctatgcgacgcaccaggaccgcatcctcaagccgatgatccgcgacaagatcaccgac
ccctggcgcgaggtgaactggaccgaggcgctggacttcaccgcaacaaggctgcgggcg
ctgcgcgacagccacggggcggatgccctgggcgtcatcacctcctcgcgctgcacgaac
gaagaaacatacctcgtgcaaaagcttgcccgcgcggttttcggcaccaacaacaccgac
acttgcgcgcgggtctgccattcgcccaccggctacgggctgaaacagaccttcggcacc
tcggccggaacgcaggatttcgacagcgtcgaggagaccgatctggcgctggtcatcggc
gcgaatccgaccgatgggcacccggttttcgcctcgcgcctgcgcaagcggctgcgggcg
ggggcgaaactcattgtcgtcgatccgcgccggatcgatctgctgaacacgccgcaccgg
ggcgaggcctggcatctgcagctgaagcccggcaccaatgtcgcggtgatgacggcgatg
gcgcatgtgatcgtgaccgagcagatctttgacaagcgcttcatcggggatcgctgcgat
tgggacgaatgggcggattacgccgaattcgtcgcgaacccggagtatgcgcccgaggcg
gtggaaagcctgaccggggttccggcgggattgctgcgtcaggccgcccgggcctatgcg
gcggcgccgaatgccgcgatctactatggccttggcgtgaccgagcacagccaagggtca
accacggtcatcgcgattgccaacctcgcgatgatgaccggcaatatcgggcggcccggt
gtcggcgtgaacccgctgcgggggcagaacaacgtgcagggcagctgcgacatgggcagc
ttcccgcatgaattcccgggctatcgccatgtctccgacgatgcgacgcggggccttttc
gaacgcacctggggcgtcaccctgtcgtccgaacccgggctgcggatcccgaacatgctc
gatgccgccgtcgagggccggttcaaggcgctttacgttcagggcgaggacatcctgcaa
tcggaccccgatacgcggcatgtctcggccgggctggcggcaatggatctggtgatcgtc
catgatcttttcctgaacgagaccgcgaattacgcccatgtcttcctgcccggttcgacc
tttctggaaaaggacggcaccttcaccaatgcggaacgccgcatcaaccgggtgcgccgg
gtgatggcgccaaaggcgggctttgccgattgggaggtgacgcagatgctggccaatgcg
ctgggggcgggctggcattacacgcacccgtctgaaatcatggccgaaatcgccgcgacg
acgccgggtttcgccgcggtcacctacgaaatgctggacgcccgcggctcggtgcaatgg
ccctgcaacgaaaaagcccccgaaggctcgccgatcatgcatgtcgagggcttcgtgcgc
ggcaagggccggttcatccgcacggcctacctgccgaccgacgaaaagaccgggccgcgg
ttcccgcttctgctgacgacggggcggattctgagccaatacaacgtcggcgcgcagacg
cggcggaccgaaaacaccgtctggcatggcgaggaccggctggagatccacccgaccgat
gccgagacgcggggcatccgtgacggcgactgggtgcggctggcgtcccgcgcgggggaa
accaccttgcgggcgacggtgacggaccgggtcagccccggcgtcgtctacaccaccttc
caccaccccgacacgcaggccaatgtggtcaccaccgacacttccgactgggcgacgaac
tgcccggaatacaaggtgacggcggtgcaggtggcggcgtcgaacgggccctcggactgg
cagcaggattatgcggcgcaggcggcggccgcgcggcggatcgaggcggccgaatga
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