Rhodobacter capsulatus: RCAP_rcc03303
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Entry
RCAP_rcc03303 CDS
T01213
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00300
Lysine biosynthesis
rcp01100
Metabolic pathways
rcp01120
Microbial metabolism in diverse environments
rcp01230
Biosynthesis of amino acids
Module
rcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCAP_rcc03303 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcp01002
]
RCAP_rcc03303 (dapE)
Enzymes [BR:
rcp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RCAP_rcc03303 (dapE)
Peptidases and inhibitors [BR:
rcp01002
]
Metallo peptidases
Family M20
RCAP_rcc03303 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ADE87027
UniProt:
D5AS05
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All DBs
Position
complement(3497896..3499035)
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AA seq
379 aa
AA seq
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MTLDPVQLTADLIRCPSVTPVEGGALVLLERVLSAAGFACTRVDRNGTPNLFARWGAKGA
KTFGFNGHTDVVPVGDAAAWTQEPFSGAVIEGVLWGRGATDMKSGVAAFVAAAVDFVTTT
PPEGAIILTITGDEEGPGKDGALALLDWMKAEGEAMSVCLVGEPTCPETLGDMMKIGRRG
SMTFYLEVEGVQGHSAYPHRAKNPLHALVELLGRMTAEPLDRGTEHFEPSTLQITTIDCG
NPANNVIPAKARATVNIRFNDAHSSAKIEDWARGLIAEIEAETGTRVSLCTEVSGESFLT
PPGDFVELVSRAVVSETGVVPVLSTSGGTSDARFVKDHCPVLEFGLVGKTMHQVDERIEV
AQITRLKAIYARCLRDFFA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgaccccgttcaactgactgccgatctgatccgctgcccctcggtcacgccc
gtcgaaggcggcgcgctggtgcttttggaacgggtgctctcggcggccggtttcgcctgc
acccgggtcgaccgcaacggcacgcccaatcttttcgcgcgctggggggcgaagggggcg
aagaccttcggtttcaacggtcacaccgatgtcgtgccggtgggcgatgcggccgcctgg
acgcaggagccgttttccggcgcggtgatcgagggcgtgctgtggggccgcggcgccacc
gacatgaaatcgggcgtggcggcctttgtcgccgccgccgtcgatttcgtcaccaccacc
ccgcccgagggcgcgatcatcctgacgatcaccggcgacgaggaaggcccgggcaaggat
ggcgccctggcgctgctcgactggatgaaggccgagggcgaggcgatgtcggtctgtctg
gtgggcgaaccgacctgtcccgagaccttgggagacatgatgaagatcggccgccgcggc
tcgatgaccttttacctcgaggtcgagggggtgcagggccattccgcctatccgcaccgg
gcgaaaaacccgctgcatgcgttggtcgaactgctgggccggatgacggcggaaccgctt
gatcgcggcaccgagcatttcgaaccctcgacgctgcagatcaccacgatcgattgcggc
aacccggccaacaacgtgatcccggcgaaggcgcgggcgacggtgaacatccgcttcaac
gacgcccattcctcggcaaagatcgaagactgggcccgcgggctgattgcggaaatcgag
gcggagaccggcacccgcgtcagcctgtgcaccgaggtttcgggcgaaagcttcctgacc
ccccccggcgatttcgtcgaactggtcagccgggctgtcgtgtcggaaaccggggtggtg
ccggtgctctccacctcgggcggcacctcggatgcgcgtttcgtcaaggatcactgcccg
gtgctggaattcggtctggtcggcaagaccatgcatcaggtcgatgaacgcatcgaagtg
gcgcagatcacccggctgaaggcgatctatgcccgctgcctgcgcgatttcttcgcatga
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